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1700030O20Rik Gene Detail
Summary
  • Symbol
    1700030O20Rik
  • Name
    RIKEN cDNA 1700030O20 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919536
    NCBI Gene: 72286
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:116558972-116565082 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    344 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919536
 lncRNA gene Chr10:116558972-116565082 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005158
 lincRNA gene Chr10:119516825-119523737 (-)
A/J MGP_AJ_G0005141
 lincRNA gene Chr10:114913945-114920054 (-)
AKR/J MGP_AKRJ_G0005119
 lincRNA gene Chr10:118245505-118251608 (-)
BALB/cJ MGP_BALBcJ_G0005121
 lincRNA gene Chr10:115314325-115320426 (-)
C3H/HeJ MGP_C3HHeJ_G0005070
 lincRNA gene Chr10:118478281-118484398 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005272
 lincRNA gene Chr10:123678077-123685639 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004677
 lincRNA gene Chr10:109507817-109513249 (-)
CAST/EiJ MGP_CASTEiJ_G0005018
 lincRNA gene Chr10:118773271-118779320 (-)
CBA/J MGP_CBAJ_G0005061
 lincRNA gene Chr10:128515497-128524954 (-)
DBA/2J MGP_DBA2J_G0005078
 lincRNA gene Chr10:114054240-114061396 (-)
FVB/NJ MGP_FVBNJ_G0005102
 lincRNA gene Chr10:113005772-113011854 (-)
LP/J MGP_LPJ_G0005159
 lincRNA gene Chr10:120106317-120112211 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005085
 lincRNA gene Chr10:131410339-131416449 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005277
 lincRNA gene Chr10:118317642-118324659 (-)
PWK/PhJ MGP_PWKPhJ_G0004968
 lincRNA gene Chr10:114153206-114159663 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004894
 lincRNA gene Chr10:117119949-117125506 (-)
WSB/EiJ MGP_WSBEiJ_G0005065
 lincRNA gene Chr10:118504176-118510844 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 72286 NCBI Gene Model | MGI Sequence Detail 6111 C57BL/6J ±  kb
transcript NR_045345 RefSeq | MGI Sequence Detail 594 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 12
    Phenotypes 5
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory