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2700078F05Rik Gene Detail
Summary
  • Symbol
    2700078F05Rik
  • Name
    RIKEN cDNA 2700078F05 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919876
    NCBI Gene: 72626
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr1:181777697-181780940 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    168 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919876
 lncRNA gene Chr1:181777697-181780940 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000730
 unclassified gene Chr1:188537166-188540409 (-)
A/J MGP_AJ_G0000706
 unclassified gene Chr1:180866215-180869454 (-)
AKR/J MGP_AKRJ_G0000695
 unclassified gene Chr1:186251719-186254962 (-)
BALB/cJ MGP_BALBcJ_G0000698
 unclassified gene Chr1:181506262-181509505 (-)
C3H/HeJ MGP_C3HHeJ_G0000684
 unclassified gene Chr1:187037210-187040453 (-)
C57BL/6NJ MGP_C57BL6NJ_G0000814
 unclassified gene Chr1:194633993-194637236 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000551
 unclassified gene Chr1:171821024-171824367 (-)
CAST/EiJ MGP_CASTEiJ_G0000675
 unclassified gene Chr1:186399610-186402870 (-)
CBA/J MGP_CBAJ_G0000674
 unclassified gene Chr1:201840698-201843941 (-)
DBA/2J MGP_DBA2J_G0000679
 unclassified gene Chr1:179681210-179684453 (-)
FVB/NJ MGP_FVBNJ_G0000691
 unclassified gene Chr1:177793955-177797198 (-)
LP/J MGP_LPJ_G0000736
 unclassified gene Chr1:189746787-189750030 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0000683
 unclassified gene Chr1:208916611-208919850 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000807
 unclassified gene Chr1:186053836-186057103 (-)
PWK/PhJ MGP_PWKPhJ_G0000628
 unclassified gene Chr1:178835343-178838587 (-)
SPRET/EiJ MGP_SPRETEiJ_G0000602
 unclassified gene Chr1:185007554-185010820 (-)
WSB/EiJ MGP_WSBEiJ_G0000682
 unclassified gene Chr1:186254273-186257516 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000103722 Ensembl Gene Model | MGI Sequence Detail 3244 C57BL/6J ±  kb
transcript AK144254 GenBank | ENA | DDBJ | MGI Sequence Detail 2554 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory