About   Help   FAQ
Ssbp1 Gene Detail
Summary
  • Symbol
    Ssbp1
  • Name
    single-stranded DNA binding protein 1
  • Synonyms
    2810480P10Rik, G630031O20Rik, mtDBP
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920040
    NCBI Gene: 381760
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:40448302-40458757 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 18.82 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    370 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920040
 protein coding gene Chr6:40448286-40461634 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030608
 protein coding gene Chr6:38931685-38945012 (+)
A/J MGP_AJ_G0030581
 protein coding gene Chr6:37227009-37240337 (+)
AKR/J MGP_AKRJ_G0030508
 protein coding gene Chr6:38399407-38417043 (+)
BALB/cJ MGP_BALBcJ_G0030591
 protein coding gene Chr6:37432495-37445840 (+)
C3H/HeJ MGP_C3HHeJ_G0030304
 protein coding gene Chr6:38422122-38435444 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031045
 protein coding gene Chr6:39895632-39908999 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028257
 protein coding gene Chr6:35088631-35102242 (+)
CAST/EiJ MGP_CASTEiJ_G0029706
 protein coding gene Chr6:38347269-38362511 (+)
CBA/J MGP_CBAJ_G0030282
 protein coding gene Chr6:41492086-41505426 (+)
DBA/2J MGP_DBA2J_G0030426
 protein coding gene Chr6:37028856-37042179 (+)
FVB/NJ MGP_FVBNJ_G0030380
 protein coding gene Chr6:36816672-36830017 (+)
LP/J MGP_LPJ_G0030513
 protein coding gene Chr6:38937577-38950914 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030416
 protein coding gene Chr6:43732036-43745319 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031075
 protein coding gene Chr6:38373420-38386761 (+)
PWK/PhJ MGP_PWKPhJ_G0029420
 protein coding gene Chr6:36727714-36741452 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029256
 protein coding gene Chr6:38087861-38101310 (+)
WSB/EiJ MGP_WSBEiJ_G0029782
 protein coding gene Chr6:38311581-38324848 (+)



Homology
more
  • Human Ortholog
    SSBP1, single stranded DNA binding protein 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SSBP1, single stranded DNA binding protein 1
  • Synonyms
    mtSSB, Mt-SSB, OPA13, SOSS-B1, SSBP
  • Links
    NCBI Gene ID: 6742
    neXtProt AC: NX_Q04837
    UniProt: Q04837

  • Chr Location
    7q34; chr7:141738321-141787922 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human SSBP1 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    26
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    750
  • Tissues
    6
  • cDNA Data
    10
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381760 NCBI Gene Model | MGI Sequence Detail 10456 C57BL/6J ±  kb
transcript NM_001286663 RefSeq | MGI Sequence Detail 2047 Not Specified  
polypeptide Q9CYR0 UniProt | EBI | MGI Sequence Detail 152 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000015648 single-stranded DNA-binding protein, mitochondrial
    (term hierarchy)
  • InterPro Domains
    IPR012340 Nucleic acid-binding, OB-fold
    IPR000424 Primosome PriB/single-strand DNA-binding
    IPR011344 Single-stranded DNA-binding protein
  • GlyGen
    Q9CYR0 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 9
Other
Accession IDs
less
MGI:2443899
References
more
  • Summaries
    All 42
    Developmental Gene Expression 1
    Gene Ontology 6
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory