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2900052N01Rik Gene Detail
Summary
  • Symbol
    2900052N01Rik
  • Name
    RIKEN cDNA 2900052N01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920290
    NCBI Gene: 73040
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:46824901-46838664 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 25.60 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    408 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920290
 lncRNA gene Chr9:46824775-46838665 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007433
 lincRNA gene Chr9:45602544-45617773 (+)
A/J MGP_AJ_G0007428
 lincRNA gene Chr9:44284133-44298007 (+)
AKR/J MGP_AKRJ_G0007401
 lincRNA gene Chr9:45187999-45201743 (+)
BALB/cJ MGP_BALBcJ_G0007406
 lincRNA gene Chr9:43988348-44002342 (+)
C3H/HeJ MGP_C3HHeJ_G0007350
 lincRNA gene Chr9:45647367-45664735 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007577
 lincRNA gene Chr9:46868712-46886068 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006767
 lincRNA gene Chr9:43782391-43796172 (+)
CAST/EiJ MGP_CASTEiJ_G0007254
 lincRNA gene Chr9:45540500-45555291 (+)
CBA/J MGP_CBAJ_G0007332
 lincRNA gene Chr9:48593913-48609456 (+)
DBA/2J MGP_DBA2J_G0007356
 lincRNA gene Chr9:44138894-44153112 (+)
FVB/NJ MGP_FVBNJ_G0007374
 lincRNA gene Chr9:43397291-43411002 (+)
LP/J MGP_LPJ_G0007438
 lincRNA gene Chr9:45914900-45932434 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007354
 lincRNA gene Chr9:50330018-50345841 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007581
 lincRNA gene Chr9:45094250-45107997 (+)
PWK/PhJ MGP_PWKPhJ_G0007195
 lincRNA gene Chr9:44071099-44086223 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007100
 lincRNA gene Chr9:45441105-45454739 (+)
WSB/EiJ MGP_WSBEiJ_G0007314
 lincRNA gene Chr9:45157859-45171620 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
  • All Sequences
    36
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 73040 NCBI Gene Model | MGI Sequence Detail 13764 C57BL/6J ±  kb
transcript NR_015605 RefSeq | MGI Sequence Detail 2585 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
Other
Accession IDs
less
MGI:2143242
References
more
  • Summaries
    All 16
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory