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3110018I06Rik Gene Detail
Summary
  • Symbol
    3110018I06Rik
  • Name
    RIKEN cDNA 3110018I06 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920410
    NCBI Gene: 73160
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr12:107454891-107455895 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 58.01 cM, cytoband F1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    158 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920410
 lncRNA gene Chr12:107454891-107455895 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020098
 protein coding gene Chr12:109527814-109528818 (+)
A/J MGP_AJ_G0020052
 protein coding gene Chr12:105405356-105406360 (+)
AKR/J MGP_AKRJ_G0020028
 protein coding gene Chr12:108466357-108467361 (+)
BALB/cJ MGP_BALBcJ_G0020038
 protein coding gene Chr12:105814238-105815242 (+)
C3H/HeJ MGP_C3HHeJ_G0019840
 protein coding gene Chr12:108903897-108904901 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020483
 protein coding gene Chr12:112877789-112878793 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018095
 protein coding gene Chr12:101953364-101954379 (+)
CAST/EiJ MGP_CASTEiJ_G0019382
 protein coding gene Chr12:103785656-103786658 (+)
CBA/J MGP_CBAJ_G0019807
 protein coding gene Chr12:117390559-117391563 (+)
DBA/2J MGP_DBA2J_G0019924
 protein coding gene Chr12:104910679-104911683 (+)
FVB/NJ MGP_FVBNJ_G0019909
 protein coding gene Chr12:103702994-103703998 (+)
LP/J MGP_LPJ_G0019999
 protein coding gene Chr12:109388730-109389734 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019947
 protein coding gene Chr12:120644254-120645258 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020512
 protein coding gene Chr12:107888990-107889994 (+)
PWK/PhJ MGP_PWKPhJ_G0019141
 protein coding gene Chr12:99529824-99530828 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018945
 protein coding gene Chr12:102118918-102119922 (+)
WSB/EiJ MGP_WSBEiJ_G0019439
 protein coding gene Chr12:108843679-108844683 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    22
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000060375 Ensembl Gene Model | MGI Sequence Detail 1005 C57BL/6J ±  kb
transcript ENSMUST00000082269 Ensembl | MGI Sequence Detail 1005 Not Applicable  
polypeptide Q9CXS0 UniProt | EBI | MGI Sequence Detail 120 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory