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3110083C13Rik Gene Detail
Summary
  • Symbol
    3110083C13Rik
  • Name
    RIKEN cDNA 3110083C13 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920458
    NCBI Gene: 73208
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:58236769-58241162 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 30.51 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    112 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920458
 lncRNA gene Chr14:58236747-58242569 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005554
 lincRNA gene Chr14:52238314-52242686 (+)
A/J MGP_AJ_G0005539
 lincRNA gene Chr14:51175096-51179468 (+)
AKR/J MGP_AKRJ_G0005518
 lincRNA gene Chr14:52967210-52971579 (+)
BALB/cJ MGP_BALBcJ_G0005521
 lincRNA gene Chr14:51120334-51124703 (+)
C3H/HeJ MGP_C3HHeJ_G0005467
 lincRNA gene Chr14:52636467-52640881 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005677
 lincRNA gene Chr14:54797335-54801704 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005045
 lincRNA gene Chr14:49252921-49257272 (+)
CAST/EiJ MGP_CASTEiJ_G0005410
 lincRNA gene Chr14:48982011-48986387 (+)
CBA/J MGP_CBAJ_G0005457
 lincRNA gene Chr14:56421201-56425573 (+)
DBA/2J MGP_DBA2J_G0005472
 lincRNA gene Chr14:50844142-50848520 (+)
FVB/NJ MGP_FVBNJ_G0005498
 lincRNA gene Chr14:50238365-50242748 (+)
LP/J MGP_LPJ_G0005557
 lincRNA gene Chr14:53265529-53269900 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005483
 lincRNA gene Chr14:55775627-55780118 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005676
 lincRNA gene Chr14:52119076-52123445 (+)
PWK/PhJ MGP_PWKPhJ_G0005360
 lincRNA gene Chr14:47393673-47398073 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005278
 lincRNA gene Chr14:48200204-48204557 (+)
WSB/EiJ MGP_WSBEiJ_G0005460
 lincRNA gene Chr14:52437473-52441844 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 73208 NCBI Gene Model | MGI Sequence Detail 4394 C57BL/6J ±  kb
transcript NR_166770 RefSeq | MGI Sequence Detail 877 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory