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1700036O09Rik Gene Detail
Summary
  • Symbol
    1700036O09Rik
  • Name
    RIKEN cDNA 1700036O09 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920512
    NCBI Gene: 73262
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:66501802-66502809 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 34.81 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    137 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920512
 lncRNA gene ChrX:66501802-66502809 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007541
 lincRNA gene ChrX:63073892-63074900 (+)
A/J MGP_AJ_G0007538
 lincRNA gene ChrX:63187698-63189672 (+)
AKR/J MGP_AKRJ_G0007509
 lincRNA gene ChrX:64924723-64925730 (+)
BALB/cJ MGP_BALBcJ_G0007515
 lincRNA gene ChrX:62453450-62456771 (+)
C3H/HeJ MGP_C3HHeJ_G0007460
 lincRNA gene ChrX:63513178-63514194 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007685
 lincRNA gene ChrX:64942400-64943407 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006866
 lincRNA gene ChrX:62413711-62414741 (+)
CAST/EiJ MGP_CASTEiJ_G0007363
 lincRNA gene ChrX:49043047-49044316 (+)
CBA/J MGP_CBAJ_G0007441
 lincRNA gene ChrX:66762940-66769970 (+)
DBA/2J MGP_DBA2J_G0007467
 lincRNA gene ChrX:62751925-62752805 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0007547
 lincRNA gene ChrX:63846205-63847404 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007464
 lincRNA gene ChrX:68936517-68936825 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007691
 lincRNA gene ChrX:62908320-62909871 (+)
PWK/PhJ MGP_PWKPhJ_G0007304
 lincRNA gene ChrX:47276558-47276857 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007208
 lincRNA gene ChrX:50013483-50016637 (+)
WSB/EiJ MGP_WSBEiJ_G0007423
 lincRNA gene ChrX:62273407-62274173 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086185 Ensembl Gene Model | MGI Sequence Detail 1008 C57BL/6J ±  kb
transcript ENSMUST00000136834 Ensembl | MGI Sequence Detail 349 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory