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1700040L08Rik Gene Detail
Summary
  • Symbol
    1700040L08Rik
  • Name
    RIKEN cDNA 1700040L08 gene
  • Synonyms
    Gm44195
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920544
    NCBI Gene: 73294
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:71520176-71521098 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    79 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920544
 lncRNA gene Chr6:71520176-71521098 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004285
 antisense lncRNA gene Chr6:72026409-72027331 (-)
A/J MGP_AJ_G0004263
 antisense lncRNA gene Chr6:69255577-69256499 (-)
AKR/J MGP_AKRJ_G0004244
 antisense lncRNA gene Chr6:71268705-71269628 (-)
BALB/cJ MGP_BALBcJ_G0004250
 antisense lncRNA gene Chr6:69290248-69291170 (-)
C3H/HeJ MGP_C3HHeJ_G0004255
 antisense lncRNA gene Chr6:112984724-112985647 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004399
 antisense lncRNA gene Chr6:73925920-73926842 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003872
 antisense lncRNA gene Chr6:68445745-68446648 (-)
CAST/EiJ MGP_CASTEiJ_G0004160
 antisense lncRNA gene Chr6:71113069-71113991 (-)
CBA/J MGP_CBAJ_G0004192
 antisense lncRNA gene Chr6:76875782-76876705 (-)
DBA/2J MGP_DBA2J_G0004208
 antisense lncRNA gene Chr6:68641879-68642802 (-)
FVB/NJ MGP_FVBNJ_G0004223
 antisense lncRNA gene Chr6:68000040-68000962 (-)
LP/J MGP_LPJ_G0004286
 antisense lncRNA gene Chr6:71952353-71953275 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004214
 antisense lncRNA gene Chr6:80363018-80363941 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004396
 antisense lncRNA gene Chr6:71091424-71092346 (-)
PWK/PhJ MGP_PWKPhJ_G0004113
 antisense lncRNA gene Chr6:67518619-67519647 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004057
 antisense lncRNA gene Chr6:69819501-69820460 (-)
WSB/EiJ MGP_WSBEiJ_G0004196
 antisense lncRNA gene Chr6:71441651-71442574 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107406 Ensembl Gene Model | MGI Sequence Detail 923 C57BL/6J ±  kb
transcript ENSMUST00000205011 Ensembl | MGI Sequence Detail 541 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGI:5690587
References
more
  • Summaries
    All 11
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory