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1700061I17Rik Gene Detail
Summary
  • Symbol
    1700061I17Rik
  • Name
    RIKEN cDNA 1700061I17 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920612
    NCBI Gene: 433646
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:116854171-116871414 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 50.51 cM, cytoband G2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    742 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920612
 lncRNA gene Chr3:116854171-116871414 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006285
 lincRNA gene Chr3:119026499-119047593 (-)
A/J MGP_AJ_G0006278
 lincRNA gene Chr3:115110608-115127202 (-)
AKR/J MGP_AKRJ_G0006254
 lincRNA gene Chr3:118004989-118031764 (-)
BALB/cJ MGP_BALBcJ_G0006252
 lincRNA gene Chr3:114952226-114968804 (-)
C3H/HeJ MGP_C3HHeJ_G0006204
 lincRNA gene Chr3:118405310-118421898 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006417
 lincRNA gene Chr3:123379447-123397500 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005713
 lincRNA gene Chr3:110761251-110778292 (-)
CAST/EiJ MGP_CASTEiJ_G0006137
 lincRNA gene Chr3:117668852-117689489 (-)
CBA/J MGP_CBAJ_G0006187
 lincRNA gene Chr3:127603572-127620168 (-)
DBA/2J MGP_DBA2J_G0006209
 lincRNA gene Chr3:114327510-114345376 (-)
FVB/NJ MGP_FVBNJ_G0006230
 lincRNA gene Chr3:111957822-111975679 (-)
LP/J MGP_LPJ_G0006290
 lincRNA gene Chr3:120541218-120563489 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006221
 lincRNA gene Chr3:134964335-134982170 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006423
 lincRNA gene Chr3:117558890-117581305 (-)
PWK/PhJ MGP_PWKPhJ_G0006076
 lincRNA gene Chr3:113972111-113991795 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005988
 lincRNA gene Chr3:115574381-115593246 (-)
WSB/EiJ MGP_WSBEiJ_G0006185
 lincRNA gene Chr3:118260892-118279631 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700061I17Rik
  • Find Mice (IMSR)
    2 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 433646 NCBI Gene Model | MGI Sequence Detail 17244 C57BL/6J ±  kb
transcript NR_038029 RefSeq | MGI Sequence Detail 1962 C57BL/6  
polypeptide Q9D9J4 UniProt | EBI | MGI Sequence Detail 126 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 3
References
more
  • Summaries
    All 18
    Diseases 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory