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1700052K11Rik Gene Detail
Summary
  • Symbol
    1700052K11Rik
  • Name
    RIKEN cDNA 1700052K11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920681
    NCBI Gene: 73431
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:105069846-105072259 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 68.61 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    85 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920681
 lncRNA gene Chr11:105068552-105072259 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003077
 antisense lncRNA gene Chr11:108396282-108401631 (-)
A/J MGP_AJ_G0003054
 antisense lncRNA gene Chr11:103776309-103780002 (-)
AKR/J MGP_AKRJ_G0003035
 antisense lncRNA gene Chr11:106911859-106915558 (-)
BALB/cJ MGP_BALBcJ_G0003041
 antisense lncRNA gene Chr11:104197162-104201302 (-)
C3H/HeJ MGP_C3HHeJ_G0002997
 antisense lncRNA gene Chr11:107195794-107199491 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003183
 antisense lncRNA gene Chr11:111764081-111769991 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002720
 antisense lncRNA gene Chr11:101118816-101122558 (-)
CAST/EiJ MGP_CASTEiJ_G0002967
 antisense lncRNA gene Chr11:108238288-108241985 (-)
CBA/J MGP_CBAJ_G0002994
 antisense lncRNA gene Chr11:116396087-116399792 (-)
DBA/2J MGP_DBA2J_G0003000
 antisense lncRNA gene Chr11:103268972-103272671 (-)
FVB/NJ MGP_FVBNJ_G0003019
 antisense lncRNA gene Chr11:102780391-102784112 (-)
LP/J MGP_LPJ_G0003076
 antisense lncRNA gene Chr11:108861220-108866749 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003007
 antisense lncRNA gene Chr11:115665195-115668840 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003187
 antisense lncRNA gene Chr11:107385661-107389299 (-)
PWK/PhJ MGP_PWKPhJ_G0002925
 antisense lncRNA gene Chr11:104351959-104355612 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002869
 antisense lncRNA gene Chr11:107136569-107140073 (-)
WSB/EiJ MGP_WSBEiJ_G0002997
 antisense lncRNA gene Chr11:107348989-107354378 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    15
Sequences &
Gene Models
less
  • All Sequences
    33
  • RefSeq
    1
  • UniProt
    4
Representative SequencesLengthStrain/SpeciesFlank
genomic 73431 NCBI Gene Model | MGI Sequence Detail 2414 C57BL/6J ±  kb
transcript NR_027956 RefSeq | MGI Sequence Detail 2414 C57BL/6  
polypeptide Q3U0L3 UniProt | EBI | MGI Sequence Detail 189 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 3
Other
Accession IDs
less
MGI:2144279
References
more
  • Summaries
    All 16
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory