1700120C14Rik Gene Detail

Summary

• Symbol
  1700120C14Rik
• Name
  RIKEN cDNA 1700120C14 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1920850
  NCBI Gene: 73600
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:99149669-99159922 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  395 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1920850	lncRNA gene	Chr15:99147117-99159925 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015310	unclassified non-coding RNA gene	Chr15:101071699-101085021 (+)
A/J	MGP_AJ_G0015285	unclassified non-coding RNA gene	Chr15:97057565-97068637 (+)
AKR/J	MGP_AKRJ_G0015248	unclassified non-coding RNA gene	Chr15:100050671-100065122 (+)
BALB/cJ	MGP_BALBcJ_G0015248	unclassified non-coding RNA gene	Chr15:97245011-97255266 (+)
C3H/HeJ	MGP_C3HHeJ_G0015072	unclassified non-coding RNA gene	Chr15:100112813-100125012 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015702	unclassified non-coding RNA gene	Chr15:104829999-104861490 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013444	unclassified non-coding RNA gene	Chr15:92954946-92956285 (+)
CAST/EiJ	MGP_CASTEiJ_G0014623	unclassified non-coding RNA gene	Chr15:100961110-100977624 (+)
CBA/J	MGP_CBAJ_G0015051	unclassified non-coding RNA gene	Chr15:108409830-108421772 (+)
DBA/2J	MGP_DBA2J_G0015146	unclassified non-coding RNA gene	Chr15:96500841-96511035 (+)
FVB/NJ	MGP_FVBNJ_G0015153	unclassified non-coding RNA gene	Chr15:95483787-95497212 (+)
LP/J	MGP_LPJ_G0015226	unclassified non-coding RNA gene	Chr15:101213678-101225613 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015179	unclassified non-coding RNA gene	Chr15:112348091-112360418 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015742	unclassified non-coding RNA gene	Chr15:100145564-100156984 (+)
PWK/PhJ	MGP_PWKPhJ_G0014414	unclassified non-coding RNA gene	Chr15:96632016-96643067 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014201	unclassified non-coding RNA gene	Chr15:99997087-100010036 (+)
WSB/EiJ	MGP_WSBEiJ_G0014730	unclassified non-coding RNA gene	Chr15:100678238-100690113 (+)

Homology

• Gene Tree
  1700120C14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  20 phenotype references
  

• All Mutations and Alleles
  33
• Chemically induced (other)
  1
• Gene trapped
  31
• Radiation induced
  1
• Genomic Mutations
  2 involving 1700120C14Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000100599 (Evidence)
• NCBI Gene
  73600

Representative Sequences			Length	Strain/Species
genomic	73600	NCBI Gene Model | MGI Sequence Detail	10254	C57BL/6J
transcript	NR_045627	RefSeq | MGI Sequence Detail	388	ZRU/MplStud

Molecular
Reagents

• All nucleic 4

  cDNA 4

References

• Summaries
  All 28

  Phenotypes 20
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27