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1700123O12Rik Gene Detail
Summary
  • Symbol
    1700123O12Rik
  • Name
    RIKEN cDNA 1700123O12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920874
    NCBI Gene: 73624
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:10508031-10797802 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 4.66 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    8084 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920874
 lncRNA gene Chr4:10479962-10797811 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006383
 lincRNA gene Chr4:7119486-7429044 (-)
A/J MGP_AJ_G0006375
 lincRNA gene Chr4:6979577-7312782 (-)
AKR/J MGP_AKRJ_G0006350
 lincRNA gene Chr4:7039835-7373462 (-)
BALB/cJ MGP_BALBcJ_G0006349
 lincRNA gene Chr4:6919181-7236215 (-)
C3H/HeJ MGP_C3HHeJ_G0006300
 lincRNA gene Chr4:7219313-7531572 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006515
 lincRNA gene Chr4:7491920-7837543 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005807
 lincRNA gene Chr4:6546962-6841125 (-)
CAST/EiJ MGP_CASTEiJ_G0006234
 lincRNA gene Chr4:7048476-7364274 (-)
CBA/J MGP_CBAJ_G0006283
 lincRNA gene Chr4:7645508-7989139 (-)
DBA/2J MGP_DBA2J_G0006304
 lincRNA gene Chr4:6882584-7197233 (-)
FVB/NJ MGP_FVBNJ_G0006327
 lincRNA gene Chr4:6748009-7038272 (-)
LP/J MGP_LPJ_G0006387
 lincRNA gene Chr4:7145837-7494833 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006317
 lincRNA gene Chr4:7821859-8194534 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006520
 lincRNA gene Chr4:7055394-7385894 (-)
PWK/PhJ MGP_PWKPhJ_G0006170
 lincRNA gene Chr4:6877044-7184772 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006084
 lincRNA gene Chr4:6990469-7313457 (-)
WSB/EiJ MGP_WSBEiJ_G0006279
 lincRNA gene Chr4:7123777-7439401 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 73624 NCBI Gene Model | MGI Sequence Detail 289772 C57BL/6J ±  kb
transcript NR_045185 RefSeq | MGI Sequence Detail 568 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 13
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory