About   Help   FAQ
4930405D11Rik Gene Detail
Summary
  • Symbol
    4930405D11Rik
  • Name
    RIKEN cDNA 4930405D11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921172
    NCBI Gene: 73922
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:90695518-90785975 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 56.10 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2770 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921172
 lncRNA gene Chr11:90695517-90785978 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005285
 lincRNA gene Chr11:92656756-92751132 (+)
A/J MGP_AJ_G0005269
 lincRNA gene Chr11:89031969-89119699 (+)
AKR/J MGP_AKRJ_G0005247
 lincRNA gene Chr11:91777295-91869061 (+)
BALB/cJ MGP_BALBcJ_G0005250
 lincRNA gene Chr11:89478027-89563110 (+)
C3H/HeJ MGP_C3HHeJ_G0005199
 lincRNA gene Chr11:91802628-91891001 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005402
 lincRNA gene Chr11:95556741-95660679 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004795
 lincRNA gene Chr11:86038865-86119173 (+)
CAST/EiJ MGP_CASTEiJ_G0005146
 lincRNA gene Chr11:92514848-92610279 (+)
CBA/J MGP_CBAJ_G0005189
 lincRNA gene Chr11:99508763-99631109 (+)
DBA/2J MGP_DBA2J_G0005206
 lincRNA gene Chr11:88566414-88653395 (+)
FVB/NJ MGP_FVBNJ_G0005231
 lincRNA gene Chr11:88084206-88170583 (+)
LP/J MGP_LPJ_G0005287
 lincRNA gene Chr11:93178024-93279774 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005213
 lincRNA gene Chr11:99401427-99512412 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005406
 lincRNA gene Chr11:92016376-92104251 (+)
PWK/PhJ MGP_PWKPhJ_G0005095
 lincRNA gene Chr11:89484803-89571938 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005017
 lincRNA gene Chr11:91572469-91656857 (+)
WSB/EiJ MGP_WSBEiJ_G0005194
 lincRNA gene Chr11:91871529-91969338 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Targeted
    3
  • Genomic Mutations
    4 involving 4930405D11Rik
  • Find Mice (IMSR)
    1 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085940 Ensembl Gene Model | MGI Sequence Detail 90458 C57BL/6J ±  kb
transcript ENSMUST00000142521 Ensembl | MGI Sequence Detail 645 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 19
    Diseases 1
    Phenotypes 10
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory