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Cldn34c4 Gene Detail
Summary
  • Symbol
    Cldn34c4
  • Name
    claudin 34C4
  • Synonyms
    4930412D23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921184
    NCBI Gene: 73934
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:126628805-126644177 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 49.81 cM, cytoband E2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    331 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921184
 protein coding gene ChrX:126628798-126644177 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036051
 protein coding gene ChrX:124734902-124744139 (-)
A/J MGP_AJ_G0036035
 protein coding gene ChrX:124177605-124185813 (-)
AKR/J MGP_AKRJ_G0035954
 protein coding gene ChrX:128215301-128229118 (-)
BALB/cJ MGP_BALBcJ_G0036025
 protein coding gene ChrX:122684765-122693649 (-)
C3H/HeJ MGP_C3HHeJ_G0035729
 protein coding gene ChrX:124844136-124858295 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036547
 protein coding gene ChrX:128379918-128388245 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033375
 protein coding gene ChrX:116830056-116836403 (-)
CAST/EiJ MGP_CASTEiJ_G0035016
 protein coding gene ChrX:105911447-105917785 (-)
CBA/J MGP_CBAJ_G0035706
 protein coding gene ChrX:132181596-132199899 (-)
DBA/2J MGP_DBA2J_G0035859
 protein coding gene ChrX:123595941-123604016 (-)
FVB/NJ MGP_FVBNJ_G0035801
 protein coding gene ChrX:122897609-122912926 (-)
LP/J MGP_LPJ_G0035952
 protein coding gene ChrX:125591395-125599578 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035829
 protein coding gene ChrX:138856963-138871414 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036576
 protein coding gene ChrX:124218376-124227050 (-)
PWK/PhJ MGP_PWKPhJ_G0034708
 protein coding gene ChrX:102944330-102945019 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034540
 protein coding gene ChrX:106381197-106388884 (-)
WSB/EiJ MGP_WSBEiJ_G0035153
 protein coding gene ChrX:122739759-122747409 (-)



Homology
more
  • Human Ortholog
    CLDN34, claudin 34
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000043569 Ensembl Gene Model | MGI Sequence Detail 15373 C57BL/6J ±  kb
transcript ENSMUST00000052500 Ensembl | MGI Sequence Detail 814 Not Applicable  
polypeptide ENSMUSP00000062601 Ensembl | MGI Sequence Detail 212 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR006187 Claudin
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 15
    Gene Ontology 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory