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Ccdc175 Gene Detail
Summary
  • Symbol
    Ccdc175
  • Name
    coiled-coil domain containing 175
  • Synonyms
    4930403N07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921186
    NCBI Gene: 73936
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:72148074-72231803 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 30.20 cM, cytoband C3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2105 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921186
 protein coding gene Chr12:72148066-72231803 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019823
 protein coding gene Chr12:71919893-72006105 (-)
A/J MGP_AJ_G0019781
 protein coding gene Chr12:69240561-69324044 (-)
AKR/J MGP_AKRJ_G0019757
 protein coding gene Chr12:71320347-71407391 (-)
BALB/cJ MGP_BALBcJ_G0019761
 protein coding gene Chr12:69721523-69801771 (-)
C3H/HeJ MGP_C3HHeJ_G0019566
 protein coding gene Chr12:71784658-71864493 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020213
 protein coding gene Chr12:74189845-74281441 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017833
 protein coding gene Chr12:66726757-66803156 (-)
CAST/EiJ MGP_CASTEiJ_G0019118
 protein coding gene Chr12:66537510-66629099 (-)
CBA/J MGP_CBAJ_G0019536
 protein coding gene Chr12:76941093-77045413 (-)
DBA/2J MGP_DBA2J_G0019652
 protein coding gene Chr12:69145490-69227596 (-)
FVB/NJ MGP_FVBNJ_G0019639
 protein coding gene Chr12:68019115-68099622 (-)
LP/J MGP_LPJ_G0019724
 protein coding gene Chr12:71936513-72020991 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019678
 protein coding gene Chr12:80130789-80225916 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020248
 protein coding gene Chr12:70826442-70916508 (-)
PWK/PhJ MGP_PWKPhJ_G0018883
 protein coding gene Chr12:63441531-63525435 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018678
 protein coding gene Chr12:65229695-65314368 (-)
WSB/EiJ MGP_WSBEiJ_G0019169
 protein coding gene Chr12:71423918-71511532 (-)



Homology
more
  • Human Ortholog
    CCDC175, coiled-coil domain containing 175
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC175, coiled-coil domain containing 175
  • Synonyms
    c14_5395, C14orf38
  • Links
    NCBI Gene ID: 729665
    neXtProt AC: NX_P0C221
    UniProt: P0C221

  • Chr Location
    14q23.1; chr14:59504539-59576812 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Targeted
    1
  • Genomic Mutations
    1 involving Ccdc175
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    38 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021086 Ensembl Gene Model | MGI Sequence Detail 83730 C57BL/6J ±  kb
transcript ENSMUST00000021494 Ensembl | MGI Sequence Detail 2622 Not Applicable  
polypeptide ENSMUSP00000021494 Ensembl | MGI Sequence Detail 822 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory