Speer8-ps1 Pseudogene Detail

Summary

• Symbol
  Speer8-ps1
• Name
  spermatogenesis associated glutamate (E)-rich protein 8, pseudogene 1
• Synonyms
  4933405L09Rik, SPEER-8

• Feature Type
  pseudogene
• IDs
  MGI:1921312
  NCBI Gene: 74062
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:14995308-15028555 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 6.47 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  258 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921312	pseudogene	Chr5:14995308-15028555 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• cDNA Data
  2

• Other Mouse Links
  Allen Institute
  GEO

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  1

• NCBI Gene
  74062

Representative Sequences			Length	Strain/Species
genomic	74062	NCBI Gene Model | MGI Sequence Detail	33248	C57BL/6J
transcript	NR_001584	RefSeq | MGI Sequence Detail	1121	C57BL/6

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 2

References

• Summaries
  All 10
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:83573 Spiess AN, et al., SPEER--A New Family of Testis-Specific Genes from the Mouse. Biol Reprod. 2003 Jun;68(6):2044-54