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1700016A09Rik Gene Detail
Summary
  • Symbol
    1700016A09Rik
  • Name
    RIKEN cDNA 1700016A09 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921477
    NCBI Gene: 74227
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:121263631-121264465 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    53 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921477
 lncRNA gene Chr8:121263631-121264465 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002274
 unclassified gene Chr8:123964642-123965476 (-)
A/J MGP_AJ_G0002251
 unclassified gene Chr8:118819187-118820021 (-)
AKR/J MGP_AKRJ_G0002237
 unclassified gene Chr8:122268755-122269589 (-)
BALB/cJ MGP_BALBcJ_G0002246
 unclassified gene Chr8:119034571-119035405 (-)
C3H/HeJ MGP_C3HHeJ_G0002222
 unclassified gene Chr8:123006298-123007132 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002371
 unclassified gene Chr8:128091595-128092429 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0001986
 unclassified gene Chr8:111695506-111696351 (-)
CAST/EiJ MGP_CASTEiJ_G0002187
 unclassified gene Chr8:123007643-123008477 (-)
CBA/J MGP_CBAJ_G0002216
 unclassified gene Chr8:132773573-132774407 (-)
DBA/2J MGP_DBA2J_G0002219
 unclassified gene Chr8:118038229-118039063 (-)
FVB/NJ MGP_FVBNJ_G0002229
 unclassified gene Chr8:117107278-117108112 (-)
LP/J MGP_LPJ_G0002273
 unclassified gene Chr8:124089871-124090705 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002203
 unclassified gene Chr8:135143597-135144431 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002359
 unclassified gene Chr8:122440843-122441677 (-)
PWK/PhJ MGP_PWKPhJ_G0002147
 unclassified gene Chr8:117816093-117816927 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002110
 unclassified gene Chr8:121146703-121147533 (-)
WSB/EiJ MGP_WSBEiJ_G0002214
 unclassified gene Chr8:123181933-123182767 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 74227 NCBI Gene Model | MGI Sequence Detail 835 C57BL/6J ±  kb
transcript NR_151732 RefSeq | MGI Sequence Detail 835 ZRU/MplStud  
polypeptide Q9DAA9 UniProt | EBI | MGI Sequence Detail 171 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory