About   Help   FAQ
1700111N16Rik Gene Detail
Summary
  • Symbol
    1700111N16Rik
  • Name
    RIKEN cDNA 1700111N16 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921555
    NCBI Gene: 74305
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:68972866-69187194 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 35.80 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    4037 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921555
 lncRNA gene ChrX:68972865-69187194 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004730
 antisense lncRNA gene ChrX:65550571-65774889 (-)
A/J MGP_AJ_G0004708
 antisense lncRNA gene ChrX:65695048-65906515 (-)
AKR/J MGP_AKRJ_G0004691
 antisense lncRNA gene ChrX:67469636-67673476 (-)
BALB/cJ MGP_BALBcJ_G0004692
 antisense lncRNA gene ChrX:64878030-65087504 (-)
C3H/HeJ MGP_C3HHeJ_G0004640
 antisense lncRNA gene ChrX:66011372-66223273 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004841
 antisense lncRNA gene ChrX:67551339-67762109 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004282
 antisense lncRNA gene ChrX:64630322-64830137 (-)
CAST/EiJ MGP_CASTEiJ_G0004597
 antisense lncRNA gene ChrX:51483639-51687570 (-)
CBA/J MGP_CBAJ_G0004635
 antisense lncRNA gene ChrX:69396149-69612013 (-)
DBA/2J MGP_DBA2J_G0004650
 antisense lncRNA gene ChrX:65228705-65460074 (-)
FVB/NJ MGP_FVBNJ_G0004668
 antisense lncRNA gene ChrX:64679850-64902900 (-)
LP/J MGP_LPJ_G0004732
 antisense lncRNA gene ChrX:66334804-66548566 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004654
 antisense lncRNA gene ChrX:71897954-72154894 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004841
 antisense lncRNA gene ChrX:65381812-65612596 (-)
PWK/PhJ MGP_PWKPhJ_G0004549
 antisense lncRNA gene ChrX:49608715-49800713 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0004640
 antisense lncRNA gene ChrX:64720257-64935886 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 74305 NCBI Gene Model | MGI Sequence Detail 214329 C57BL/6J ±  kb
transcript NR_033213 RefSeq | MGI Sequence Detail 1132 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory