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Gcc1 Gene Detail
Summary
  • Symbol
    Gcc1
  • Name
    golgi coiled coil 1
  • Synonyms
    4932417P04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921625
    NCBI Gene: 74375
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:28413784-28424152 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 11.99 cM, cytoband A3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    352 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921625
 protein coding gene Chr6:28413784-28428389 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030507
 protein coding gene Chr6:26143467-26155659 (-)
A/J MGP_AJ_G0030480
 protein coding gene Chr6:25037866-25050169 (-)
AKR/J MGP_AKRJ_G0030407
 protein coding gene Chr6:25862306-25878332 (-)
BALB/cJ MGP_BALBcJ_G0030490
 protein coding gene Chr6:25202076-25214111 (-)
C3H/HeJ MGP_C3HHeJ_G0030203
 protein coding gene Chr6:25850272-25862952 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030944
 protein coding gene Chr6:26939252-26952855 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028155
 protein coding gene Chr6:23268502-23280874 (-)
CAST/EiJ MGP_CASTEiJ_G0029605
 protein coding gene Chr6:25658639-25671123 (-)
CBA/J MGP_CBAJ_G0030181
 protein coding gene Chr6:27905873-27918098 (-)
DBA/2J MGP_DBA2J_G0030325
 protein coding gene Chr6:24993531-25005847 (-)
FVB/NJ MGP_FVBNJ_G0030279
 protein coding gene Chr6:24745121-24757732 (-)
LP/J MGP_LPJ_G0030412
 protein coding gene Chr6:26277089-26289280 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030315
 protein coding gene Chr6:30461268-30474902 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030974
 protein coding gene Chr6:25744260-25757097 (-)
PWK/PhJ MGP_PWKPhJ_G0029319
 protein coding gene Chr6:24520270-24534352 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029155
 protein coding gene Chr6:25440437-25452702 (-)
WSB/EiJ MGP_WSBEiJ_G0029681
 protein coding gene Chr6:25710552-25725234 (-)



Homology
more
  • Human Ortholog
    GCC1, GRIP and coiled-coil domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GCC1, GRIP and coiled-coil domain containing 1
  • Synonyms
    GCC1P, GCC88
  • Links
    NCBI Gene ID: 79571
    neXtProt AC: NX_Q96CN9
    UniProt: Q96CN9

  • Chr Location
    7q32.1; chr7:127580628-127593611 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    26
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74375 NCBI Gene Model | MGI Sequence Detail 10369 C57BL/6J ±  kb
transcript NM_028900 RefSeq | MGI Sequence Detail 6949 C57BL/6  
polypeptide Q9D4H2 UniProt | EBI | MGI Sequence Detail 778 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 27
    cDNA 27

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory