4930432L08Rik Gene Detail

Summary

• Symbol
  4930432L08Rik
• Name
  RIKEN cDNA 4930432L08 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1921871
  NCBI Gene: 74621
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:76479085-76489732 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 40.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  377 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921871	lncRNA gene	Chr5:76479085-76489732 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015606	unclassified non-coding RNA gene	Chr5:76503745-76514392 (+)
A/J	MGP_AJ_G0015582	unclassified non-coding RNA gene	Chr5:73581813-73592461 (+)
AKR/J	MGP_AKRJ_G0015546	unclassified non-coding RNA gene	Chr5:75976974-75987622 (+)
BALB/cJ	MGP_BALBcJ_G0015544	unclassified non-coding RNA gene	Chr5:74330062-74340709 (+)
C3H/HeJ	MGP_C3HHeJ_G0015366	unclassified non-coding RNA gene	Chr5:76364349-76374997 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015998	unclassified non-coding RNA gene	Chr5:79565921-79576566 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013733	unclassified non-coding RNA gene	Chr5:69235984-69246649 (+)
CAST/EiJ	MGP_CASTEiJ_G0014922	unclassified non-coding RNA gene	Chr5:75548066-75558718 (+)
CBA/J	MGP_CBAJ_G0015347	unclassified non-coding RNA gene	Chr5:82173159-82183807 (+)
DBA/2J	MGP_DBA2J_G0015441	unclassified non-coding RNA gene	Chr5:73657871-73668521 (+)
FVB/NJ	MGP_FVBNJ_G0015448	unclassified non-coding RNA gene	Chr5:72840212-72850860 (+)
LP/J	MGP_LPJ_G0015522	unclassified non-coding RNA gene	Chr5:76943701-76954521 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015471	unclassified non-coding RNA gene	Chr5:85357024-85367674 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016040	unclassified non-coding RNA gene	Chr5:75536169-75546816 (+)
PWK/PhJ	MGP_PWKPhJ_G0014707	unclassified non-coding RNA gene	Chr5:72664836-72675464 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014495	unclassified non-coding RNA gene	Chr5:74893843-74904599 (+)
WSB/EiJ	MGP_WSBEiJ_G0015026	unclassified non-coding RNA gene	Chr5:75842142-75852616 (+)

Homology

• Gene Tree
  4930432L08Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  2
• Endonuclease-mediated
  1
• Gene trapped
  1
• Spontaneous
  2
• Genomic Mutations
  5 involving 4930432L08Rik
• Find Mice (IMSR)
  2 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000087037 (Evidence)
• NCBI Gene
  74621

Representative Sequences			Length	Strain/Species
genomic	74621	NCBI Gene Model | MGI Sequence Detail	10648	C57BL/6J
transcript	NR_152115	RefSeq | MGI Sequence Detail	1608	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 15

  Phenotypes 7
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:233978 Mizuno S, et al., Peri-implantation lethality in mice carrying megabase-scale deletion on 5qc3.3 is caused by Exoc1 null mutation. Sci Rep. 2015;5:13632

TSS for 4930432L08Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr46723	Chr5:76479031-76479044 (+)	-47 bp