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Spata17 Gene Detail
Summary
  • Symbol
    Spata17
  • Name
    spermatogenesis associated 17
  • Synonyms
    1700065F16Rik, 4930504I07Rik, 4930513F16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921967
    NCBI Gene: 74717
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:186776845-186947662 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 90.23 cM, cytoband H5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    4229 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921967
 protein coding gene Chr1:186741811-186947705 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016922
 protein coding gene Chr1:193853235-194018711 (-)
A/J MGP_AJ_G0016901
 protein coding gene Chr1:185917571-186082531 (-)
AKR/J MGP_AKRJ_G0016866
 protein coding gene Chr1:191387181-191558437 (-)
BALB/cJ MGP_BALBcJ_G0016859
 protein coding gene Chr1:186595214-186755845 (-)
C3H/HeJ MGP_C3HHeJ_G0016683
 protein coding gene Chr1:192260686-192426955 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017322
 protein coding gene Chr1:200039920-200218382 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015029
 protein coding gene Chr1:176898017-177059207 (-)
CAST/EiJ MGP_CASTEiJ_G0016266
 protein coding gene Chr1:191757549-191935410 (-)
CBA/J MGP_CBAJ_G0016657
 protein coding gene Chr1:207497339-207674427 (-)
DBA/2J MGP_DBA2J_G0016763
 protein coding gene Chr1:184684743-184846524 (-)
FVB/NJ MGP_FVBNJ_G0016759
 protein coding gene Chr1:182764633-182922737 (-)
LP/J MGP_LPJ_G0016838
 protein coding gene Chr1:195027204-195192160 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016791
 protein coding gene Chr1:214318425-214492527 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017359
 protein coding gene Chr1:191296151-191465145 (-)
PWK/PhJ MGP_PWKPhJ_G0016053
 protein coding gene Chr1:183900219-184063077 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015829
 protein coding gene Chr1:190251673-190423734 (-)
WSB/EiJ MGP_WSBEiJ_G0016328
 protein coding gene Chr1:191469704-191645649 (-)



Homology
more
  • Human Ortholog
    SPATA17, spermatogenesis associated 17
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SPATA17, spermatogenesis associated 17
  • Synonyms
    CFAP305, FAP305, IQCH, MOT17, MSRG-11, MSRG11
  • Links
    NCBI Gene ID: 128153
    neXtProt AC: NX_Q96L03
    UniProt: Q96L03

  • Chr Location
    1q41; chr1:217631324-217871696 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    17
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000026611 Ensembl Gene Model | MGI Sequence Detail 170818 C57BL/6J ±  kb
transcript ENSMUST00000027908 Ensembl | MGI Sequence Detail 1303 Not Applicable  
polypeptide ENSMUSP00000027908 Ensembl | MGI Sequence Detail 379 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • Protein Ontology
    PR:000015482 spermatogenesis-associated protein 17
    (term hierarchy)
  • InterPro Domains
    IPR051185 Abnormal Spindle-like Microcephaly-associated
    IPR000048 IQ motif, EF-hand binding site
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 3
Other
Accession IDs
less
MGI:1921525, MGI:2441681
References
more
  • Summaries
    All 24
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:96646 Deng Y, et al., Molecular Cloning of MSRG-11 Gene Related to Apoptosis of Mouse Spermatogenic Cells. Acta Biochim Biophys Sin (Shanghai). 2005 Mar;37(3):159-66
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory