About   Help   FAQ
4930477O15Rik Gene Detail
Summary
  • Symbol
    4930477O15Rik
  • Name
    RIKEN cDNA 4930477O15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1922233
    NCBI Gene: 74983
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:121641576-121642664 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    91 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922233
 lncRNA gene Chr5:121641576-121642664 (+)
129S1/SvImJ MGP_129S1SvImJ_G0001738
 unclassified gene Chr5:124995838-124996926 (+)
A/J MGP_AJ_G0001715
 unclassified gene Chr5:119846589-119847677 (+)
AKR/J MGP_AKRJ_G0001702
 unclassified gene Chr5:123723733-123724821 (+)
BALB/cJ MGP_BALBcJ_G0001712
 unclassified gene Chr5:121228407-121229495 (+)
C3H/HeJ MGP_C3HHeJ_G0001690
 unclassified gene Chr5:124291137-124292225 (+)
C57BL/6NJ MGP_C57BL6NJ_G0001832
 unclassified gene Chr5:129750362-129751450 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0001504
 unclassified gene Chr5:114522057-114523140 (+)
CAST/EiJ MGP_CASTEiJ_G0001662
 unclassified gene Chr5:123399103-123400186 (+)
CBA/J MGP_CBAJ_G0001682
 unclassified gene Chr5:134857725-134858813 (+)
DBA/2J MGP_DBA2J_G0001686
 unclassified gene Chr5:119915959-119917047 (+)
FVB/NJ MGP_FVBNJ_G0001694
 unclassified gene Chr5:118866793-118867881 (+)
LP/J MGP_LPJ_G0001741
 unclassified gene Chr5:125506630-125507718 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0001675
 unclassified gene Chr5:138708454-138709542 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0001822
 unclassified gene Chr5:123244566-123245654 (+)
PWK/PhJ MGP_PWKPhJ_G0001621
 unclassified gene Chr5:118688969-118690057 (+)
SPRET/EiJ MGP_SPRETEiJ_G0001587
 unclassified gene Chr5:121002074-121003154 (+)
WSB/EiJ MGP_WSBEiJ_G0001682
 unclassified gene Chr5:123894559-123897408 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000104999 Ensembl Gene Model | MGI Sequence Detail 1089 C57BL/6J ±  kb
transcript AK015582 GenBank | ENA | DDBJ | MGI Sequence Detail 1090 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory