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Cldn34d Gene Detail
Summary
  • Symbol
    Cldn34d
  • Name
    claudin 34D
  • Synonyms
    4930468A15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922237
    NCBI Gene: 74987
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:75626216-75646530 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 38.30 cM, cytoband A7.1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    363 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922237
 protein coding gene ChrX:75626214-75646530 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035868
 protein coding gene ChrX:72452702-72462525 (-)
A/J MGP_AJ_G0035855
 protein coding gene ChrX:72719456-72739596 (-)
AKR/J MGP_AKRJ_G0035775
 protein coding gene ChrX:74600873-74621256 (-)
BALB/cJ MGP_BALBcJ_G0035835
 protein coding gene ChrX:71714434-71734606 (-)
C3H/HeJ MGP_C3HHeJ_G0035547
 protein coding gene ChrX:72962596-72982990 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036367
 protein coding gene ChrX:74802453-74813853 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033201
 protein coding gene ChrX:72098845-72114912 (-)
CAST/EiJ MGP_CASTEiJ_G0034836
 protein coding gene ChrX:58276680-58285750 (-)
CBA/J MGP_CBAJ_G0035520
 protein coding gene ChrX:76748262-76757917 (-)
DBA/2J MGP_DBA2J_G0035677
 protein coding gene ChrX:72155740-72176286 (-)
FVB/NJ MGP_FVBNJ_G0035618
 protein coding gene ChrX:71413399-71433718 (-)
LP/J MGP_LPJ_G0035763
 protein coding gene ChrX:73315438-73324986 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035653
 protein coding gene ChrX:79462883-79484253 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036392
 protein coding gene ChrX:72323378-72343872 (-)
PWK/PhJ MGP_PWKPhJ_G0034532
 protein coding gene ChrX:56314414-56324808 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034366
 protein coding gene ChrX:59034196-59057950 (-)
WSB/EiJ MGP_WSBEiJ_G0034972
 protein coding gene ChrX:71587804-71597549 (-)



Homology
more
  • Human Ortholog
    CLDN34, claudin 34
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74987 NCBI Gene Model | MGI Sequence Detail 20315 C57BL/6J ±  kb
transcript NM_001201395 RefSeq | MGI Sequence Detail 1003 C57BL/6  
polypeptide NP_001188324 RefSeq | MGI Sequence Detail 210 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory