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Cimip6 Gene Detail
Summary
  • Symbol
    Cimip6
  • Name
    ciliary microtubule inner protein 6
  • Synonyms
    4930505A04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922337
    NCBI Gene: 75087
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:30376006-30421827 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 17.93 cM, cytoband A4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1228 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922337
 protein coding gene Chr11:30376006-30421829 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018114
 protein coding gene Chr11:28502629-28551097 (-)
A/J MGP_AJ_G0018087
 protein coding gene Chr11:27408715-27457895 (-)
AKR/J MGP_AKRJ_G0018051
 protein coding gene Chr11:28318108-28369549 (-)
BALB/cJ MGP_BALBcJ_G0018056
 protein coding gene Chr11:27662772-27706793 (-)
C3H/HeJ MGP_C3HHeJ_G0017869
 protein coding gene Chr11:28234988-28283869 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018507
 protein coding gene Chr11:29453071-29503710 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016164
 protein coding gene Chr11:25997441-26036807 (-)
CAST/EiJ MGP_CASTEiJ_G0017431
 protein coding gene Chr11:28323513-28365129 (-)
CBA/J MGP_CBAJ_G0017842
 protein coding gene Chr11:30835047-30897950 (-)
DBA/2J MGP_DBA2J_G0017952
 protein coding gene Chr11:27281627-27323174 (-)
FVB/NJ MGP_FVBNJ_G0017946
 protein coding gene Chr11:27077812-27119717 (-)
LP/J MGP_LPJ_G0018024
 protein coding gene Chr11:28756943-28796490 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017970
 protein coding gene Chr11:31956098-32003276 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018548
 protein coding gene Chr11:28443993-28491042 (-)
PWK/PhJ MGP_PWKPhJ_G0017213
 protein coding gene Chr11:27366545-27412134 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017007
 protein coding gene Chr11:28145524-28185050 (-)
WSB/EiJ MGP_WSBEiJ_G0017483
 protein coding gene Chr11:28111602-28160243 (-)



Homology
more
  • Human Ortholog
    CIMIP6, ciliary microtubule inner protein 6
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CIMIP6, ciliary microtubule inner protein 6
  • Synonyms
    C2orf73
  • Links
    NCBI Gene ID: 129852
    neXtProt AC: NX_Q8N5S3
    UniProt: Q8N5S3

  • Chr Location
    2p16.2; chr2:54330034-54384193 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    717
  • Tissues
    7
  • cDNA Data
    6
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000040919 Ensembl Gene Model | MGI Sequence Detail 45822 C57BL/6J ±  kb
    transcript ENSMUST00000041763 Ensembl | MGI Sequence Detail 904 Not Applicable  
    polypeptide ENSMUSP00000045288 Ensembl | MGI Sequence Detail 233 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 6
      cDNA 6

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:7716860
    References
    more
    • Summaries
      All 29
      Developmental Gene Expression 1
      Phenotypes 11
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory