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Zc2hc1b Gene Detail
Summary
  • Symbol
    Zc2hc1b
  • Name
    zinc finger, C2HC-type containing 1B
  • Synonyms
    4930519B02Rik, Fam164b
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922372
    NCBI Gene: 75122
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:13025388-13053782 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 4.72 cM, cytoband A2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    847 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922372
 protein coding gene Chr10:13025284-13053782 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017019
 protein coding gene Chr10:10546355-10575373 (-)
A/J MGP_AJ_G0016997
 protein coding gene Chr10:10150695-10178694 (-)
AKR/J MGP_AKRJ_G0016961
 protein coding gene Chr10:10376729-10404512 (-)
BALB/cJ MGP_BALBcJ_G0016955
 protein coding gene Chr10:10148821-10177160 (-)
C3H/HeJ MGP_C3HHeJ_G0016780
 protein coding gene Chr10:10538314-10566283 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017417
 protein coding gene Chr10:10828088-10859563 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015122
 protein coding gene Chr10:9429994-9458186 (-)
CAST/EiJ MGP_CASTEiJ_G0016362
 protein coding gene Chr10:10399039-10428681 (-)
CBA/J MGP_CBAJ_G0016752
 protein coding gene Chr10:11231670-11262335 (-)
DBA/2J MGP_DBA2J_G0016860
 protein coding gene Chr10:10060226-10088537 (-)
FVB/NJ MGP_FVBNJ_G0016855
 protein coding gene Chr10:9894931-9923152 (-)
LP/J MGP_LPJ_G0016935
 protein coding gene Chr10:10404026-10432044 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016885
 protein coding gene Chr10:11138456-11167974 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017455
 protein coding gene Chr10:10268427-10297397 (-)
PWK/PhJ MGP_PWKPhJ_G0016147
 protein coding gene Chr10:9940942-9969630 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015930
 protein coding gene Chr10:10406899-10437797 (-)
WSB/EiJ MGP_WSBEiJ_G0016424
 protein coding gene Chr10:10311664-10340270 (-)



Homology
more
  • Human Ortholog
    ZC2HC1B, zinc finger C2HC-type containing 1B
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZC2HC1B, zinc finger C2HC-type containing 1B
  • Synonyms
    C6orf94, dJ468K18.5, FAM164B
  • Links
    NCBI Gene ID: 153918
    neXtProt AC: NX_Q5TFG8
    UniProt: Q5TFG8

  • Chr Location
    6q24.2; chr6:143864436-143938343 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75122 NCBI Gene Model | MGI Sequence Detail 28395 C57BL/6J ±  kb
transcript NM_029172 RefSeq | MGI Sequence Detail 1053 Not Specified  
polypeptide Q9D534 UniProt | EBI | MGI Sequence Detail 172 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000032200 zinc finger C2HC domain-containing protein 1B
    (term hierarchy)
  • InterPro Domains
    IPR049899 Zinc finger, C2HC/C3H-type
    IPR026319 Zinc finger C2HC domain-containing protein 1A/B-like
  • GlyGen
    Q9D534 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory