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H2bc26 Gene Detail
Summary
  • Symbol
    H2bc26
  • Name
    H2B clustered histone 26
  • Synonyms
    4930534G10Rik, H2bc26-ps, H2bu1-ps, Hist3h2bb-ps
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922442
    NCBI Gene: 382522
  • Member of
    Hist3 cluster
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:58844874-58845254 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 36.38 cM, cytoband B2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    147 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922442
 protein coding gene Chr11:58842961-58845278 (-)
129S1/SvImJ MGP_129S1SvImJ_G0010730
 pseudogene Chr11:58735835-58736299 (-)
A/J MGP_AJ_G0010725
 pseudogene Chr11:56495557-56496021 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0010698
 pseudogene Chr11:56862573-56863037 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0010973
 pseudogene Chr11:60612054-60612518 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0009602
 pseudogene Chr11:53768853-53769317 (-)
CAST/EiJ MGP_CASTEiJ_G0010432
 pseudogene Chr11:58400758-58401222 (-)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0010638
 pseudogene Chr11:55821192-55821656 (-)
LP/J MGP_LPJ_G0010710
 pseudogene Chr11:59351683-59352147 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0010613
 pseudogene Chr11:64411623-64412087 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010946
 pseudogene Chr11:58400903-58401367 (-)
PWK/PhJ MGP_PWKPhJ_G0010326
 pseudogene Chr11:56758474-56758938 (-)
SPRET/EiJ MGP_SPRETEiJ_G0010136
 pseudogene Chr11:58208799-58209263 (-)
WSB/EiJ MGP_WSBEiJ_G0010489
 pseudogene Chr11:58086071-58086535 (-)



Homology
more
  • Human Ortholog
    H2BC26, H2B clustered histone 26
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    H2BC26, H2B clustered histone 26
  • Synonyms
    H2Bb, H2BU1, HIST3H2BB
  • Links
    NCBI Gene ID: 128312
    neXtProt AC: NX_Q8N257
    UniProt: Q8N257

  • Chr Location
    1q42.13; chr1:228458103-228463104 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    3
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000080712 Ensembl Gene Model | MGI Sequence Detail 381 C57BL/6J ±  kb
transcript ENSMUST00000117558 Ensembl | MGI Sequence Detail 381 Not Applicable  
polypeptide ENSMUSP00001091675 Ensembl | MGI Sequence Detail 126 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    Genomic 1
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:2144712, MGI:6325022, MGI:7285925, MGI:7510180
References
more
  • Summaries
    All 23
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:131436 Golas A, et al., Gene mapping of sperm quality parameters in recombinant inbred strains of mice. Int J Dev Biol. 2008;52(2-3):287-93
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory