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Magea13 Gene Detail
Summary
  • Symbol
    Magea13
  • Name
    MAGE family member A13
  • Synonyms
    4930550L24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922602
    NCBI Gene: 75352
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:57956821-57965664 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 33.18 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    197 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922602
 protein coding gene ChrX:57954720-57965664 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035753
 protein coding gene ChrX:54241816-54252900 (+)
A/J MGP_AJ_G0035735
 protein coding gene ChrX:54469294-54484585 (+)
AKR/J MGP_AKRJ_G0035655
 protein coding gene ChrX:55893386-55899714 (+)
BALB/cJ MGP_BALBcJ_G0035722
 protein coding gene ChrX:53848744-53855519 (+)
C3H/HeJ MGP_C3HHeJ_G0035424
 protein coding gene ChrX:54795922-54807259 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036251
 protein coding gene ChrX:55694121-55705552 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033103
 protein coding gene ChrX:54344329-54350697 (+)
CAST/EiJ MGP_CASTEiJ_G0034717
 protein coding gene ChrX:40589421-40595921 (+)
CBA/J MGP_CBAJ_G0035399
 protein coding gene ChrX:57319391-57331106 (+)
DBA/2J MGP_DBA2J_G0035553
 protein coding gene ChrX:54037422-54045116 (+)
FVB/NJ MGP_FVBNJ_G0035503
 protein coding gene ChrX:53591920-53602275 (+)
LP/J MGP_LPJ_G0035641
 protein coding gene ChrX:54850991-54863095 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035539
 protein coding gene ChrX:58874897-58887073 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036267
 protein coding gene ChrX:54277420-54285451 (+)
PWK/PhJ MGP_PWKPhJ_G0034412
 protein coding gene ChrX:38807639-38815340 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034257
 protein coding gene ChrX:41370317-41381915 (+)
WSB/EiJ MGP_WSBEiJ_G0034860
 protein coding gene ChrX:53763368-53769688 (+)



Homology
more
  • Human Ortholog
    MAGEA13P, MAGE family member A13, pseudogene
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MAGEA13P, MAGE family member A13, pseudogene
  • Links
    NCBI Gene ID: 139363
    UniProt: A6NCF6

  • Chr Location
    Xq26.3; chrX:138482689-138484285 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    727
  • Tissues
    21
  • cDNA Data
    11
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75352 NCBI Gene Model | MGI Sequence Detail 8844 C57BL/6J ±  kb
transcript NM_023774 RefSeq | MGI Sequence Detail 1602 Not Specified  
polypeptide NP_076263 RefSeq | MGI Sequence Detail 320 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR002190 MAGE homology domain
    IPR041898 MAGE homology domain, winged helix WH1 motif
    IPR041899 MAGE homology domain, winged helix WH2 motif
    IPR037445 Melanoma-associated antigen
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 2
Other
Accession IDs
less
MGI:6448418
References
more
  • Summaries
    All 18
    Developmental Gene Expression 1
    Gene Ontology 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory