About   Help   FAQ
4930599N23Rik Gene Detail
Summary
  • Symbol
    4930599N23Rik
  • Name
    RIKEN cDNA 4930599N23 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1922629
    NCBI Gene: 75379
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:39095407-39125246 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 17.85 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    657 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922629
 lncRNA gene Chr6:39095318-39125249 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004256
 antisense lncRNA gene Chr6:37473836-37503716 (+)
A/J MGP_AJ_G0004234
 antisense lncRNA gene Chr6:35839506-35870853 (+)
AKR/J MGP_AKRJ_G0004215
 antisense lncRNA gene Chr6:36981494-37011360 (+)
BALB/cJ MGP_BALBcJ_G0004221
 antisense lncRNA gene Chr6:36052289-36083550 (+)
C3H/HeJ MGP_C3HHeJ_G0004169
 antisense lncRNA gene Chr6:36991528-37021355 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004370
 antisense lncRNA gene Chr6:38395684-38425909 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003843
 antisense lncRNA gene Chr6:33746227-33772703 (+)
CAST/EiJ MGP_CASTEiJ_G0004131
 antisense lncRNA gene Chr6:36895808-36926777 (+)
CBA/J MGP_CBAJ_G0004163
 antisense lncRNA gene Chr6:39899425-39936556 (+)
DBA/2J MGP_DBA2J_G0004179
 antisense lncRNA gene Chr6:35668713-35698744 (+)
FVB/NJ MGP_FVBNJ_G0004195
 antisense lncRNA gene Chr6:35447277-35478609 (+)
LP/J MGP_LPJ_G0004257
 antisense lncRNA gene Chr6:37502917-37532650 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004185
 antisense lncRNA gene Chr6:42267643-42299510 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004367
 antisense lncRNA gene Chr6:36915587-36946391 (+)
PWK/PhJ MGP_PWKPhJ_G0004084
 antisense lncRNA gene Chr6:35338776-35370893 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004028
 antisense lncRNA gene Chr6:36653597-36683168 (+)
WSB/EiJ MGP_WSBEiJ_G0004167
 antisense lncRNA gene Chr6:36862407-36891632 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    726
  • Tissues
    3
  • cDNA Data
    6
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 75379 NCBI Gene Model | MGI Sequence Detail 29840 C57BL/6J ±  kb
transcript NR_045813 RefSeq | MGI Sequence Detail 880 C57BL/6  
polypeptide Q8C1J2 UniProt | EBI | MGI Sequence Detail 115 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 3
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory