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Ccnl1 Gene Detail
Summary
  • Symbol
    Ccnl1
  • Name
    cyclin L1
  • Synonyms
    2610030E23Rik, ania-6a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922664
    NCBI Gene: 56706
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:65853572-65865670 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 30.25 cM, cytoband E1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    284 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922664
 protein coding gene Chr3:65853333-65869451 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027274
 protein coding gene Chr3:65080356-65092454 (-)
A/J MGP_AJ_G0027235
 protein coding gene Chr3:63195467-63207565 (-)
AKR/J MGP_AKRJ_G0027204
 protein coding gene Chr3:64482972-64495071 (-)
BALB/cJ MGP_BALBcJ_G0027247
 protein coding gene Chr3:63011990-63024336 (-)
C3H/HeJ MGP_C3HHeJ_G0026991
 protein coding gene Chr3:64770633-64782731 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027693
 protein coding gene Chr3:67528954-67541052 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025046
 protein coding gene Chr3:59581671-59594043 (-)
CAST/EiJ MGP_CASTEiJ_G0026438
 protein coding gene Chr3:64743950-64756076 (-)
CBA/J MGP_CBAJ_G0026966
 protein coding gene Chr3:69620775-69632874 (-)
DBA/2J MGP_DBA2J_G0027102
 protein coding gene Chr3:62691660-62703759 (-)
FVB/NJ MGP_FVBNJ_G0027070
 protein coding gene Chr3:61343973-61356070 (-)
LP/J MGP_LPJ_G0027210
 protein coding gene Chr3:65999549-66011647 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027088
 protein coding gene Chr3:74225400-74237497 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027751
 protein coding gene Chr3:64392986-64405084 (-)
PWK/PhJ MGP_PWKPhJ_G0026172
 protein coding gene Chr3:62444462-62456567 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025988
 protein coding gene Chr3:63588180-63600280 (-)
WSB/EiJ MGP_WSBEiJ_G0026516
 protein coding gene Chr3:64534747-64546846 (-)



Homology
more
  • Human Ortholog
    CCNL1, cyclin L1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCNL1, cyclin L1
  • Synonyms
    ania-6a, ANIA6A, BM-001, PRO1073
  • Links
    NCBI Gene ID: 57018
    neXtProt AC: NX_Q9UK58
    UniProt: Q9UK58

  • Chr Location
    3q25.31; chr3:157143121-157160760 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
  • All Mutations and Alleles
    11
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    4
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    2 involving Ccnl1
  • Incidental Mutations
    CvDC
  • Find Mice (IMSR)
    34 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    12
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    11
  • Literature Summary
    2
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000027829 Ensembl Gene Model | MGI Sequence Detail 12099 C57BL/6J ±  kb
transcript ENSMUST00000029416 Ensembl | MGI Sequence Detail 2169 Not Applicable  
polypeptide ENSMUSP00000029416 Ensembl | MGI Sequence Detail 532 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 11
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:2139871
References
more
  • Summaries
    All 47
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 12
    Phenotypes 13
  • Earliest
    J:320163 Bunnell BA, et al., Increased expression of a 58-kDa protein kinase leads to changes in the CHO cell cycle. Proc Natl Acad Sci U S A. 1990 Oct;87(19):7467-71
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory