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Cypt12 Gene Detail
Summary
  • Symbol
    Cypt12
  • Name
    cysteine-rich perinuclear theca 12
  • Synonyms
    1700001F04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922689
    NCBI Gene: 75439
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:18002608-18003116 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 4.98 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    134 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922689
 protein coding gene Chr3:18002574-18004375 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027086
 protein coding gene Chr3:15128769-15129318 (+)
A/J MGP_AJ_G0027047
 protein coding gene Chr3:15060507-15061056 (+)
AKR/J MGP_AKRJ_G0027016
 protein coding gene Chr3:15158180-15158729 (+)
BALB/cJ MGP_BALBcJ_G0027059
 protein coding gene Chr3:14836504-14837053 (+)
C3H/HeJ MGP_C3HHeJ_G0026799
 protein coding gene Chr3:15225490-15226039 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027503
 protein coding gene Chr3:16126555-16127104 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024865
 protein coding gene Chr3:13299761-13300315 (+)
CAST/EiJ MGP_CASTEiJ_G0026255
 protein coding gene Chr3:15185689-15186243 (+)
CBA/J MGP_CBAJ_G0026777
 protein coding gene Chr3:16432612-16433161 (+)
DBA/2J MGP_DBA2J_G0026911
 protein coding gene Chr3:14659633-14660182 (+)
FVB/NJ MGP_FVBNJ_G0026880
 protein coding gene Chr3:14346591-14347140 (+)
LP/J MGP_LPJ_G0027023
 protein coding gene Chr3:15744363-15744912 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026900
 protein coding gene Chr3:18435396-18435945 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027562
 protein coding gene Chr3:14937235-14937784 (+)
PWK/PhJ MGP_PWKPhJ_G0025988
 protein coding gene Chr3:14419735-14420289 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025795
 protein coding gene Chr3:14771828-14772382 (+)
WSB/EiJ MGP_WSBEiJ_G0026328
 protein coding gene Chr3:15002691-15003240 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    26
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75439 NCBI Gene Model | MGI Sequence Detail 509 C57BL/6J ±  kb
transcript NM_029289 RefSeq | MGI Sequence Detail 509 C57BL/6  
polypeptide NP_083565 RefSeq | MGI Sequence Detail 119 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 26
    cDNA 26

    Microarray probesets 3
Other
Accession IDs
less
MGI:2139939
References
more
  • Summaries
    All 19
    Diseases 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory