Rsf1os1 Gene Detail

Summary

• Symbol
  Rsf1os1
• Name
  remodeling and spacing factor 1, opposite strand 1
• Synonyms
  1700006D18Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1922698
  NCBI Gene: 75448
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:97247556-97294319 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 53.55 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  955 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922698	antisense lncRNA gene	Chr7:97247556-97294319 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004485	antisense lncRNA gene	Chr7:100305468-100353365 (-)
A/J	MGP_AJ_G0004465	antisense lncRNA gene	Chr7:97816408-97862972 (-)
AKR/J	MGP_AKRJ_G0004448	antisense lncRNA gene	Chr7:100150177-100200054 (-)
BALB/cJ	MGP_BALBcJ_G0004450	antisense lncRNA gene	Chr7:97507338-97554269 (-)
C3H/HeJ	MGP_C3HHeJ_G0004399	antisense lncRNA gene	Chr7:100496204-100544565 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004601	antisense lncRNA gene	Chr7:104207625-104261190 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004055	antisense lncRNA gene	Chr7:100265074-100312091 (-)
CAST/EiJ	MGP_CASTEiJ_G0004359	antisense lncRNA gene	Chr7:92020103-92068842 (-)
CBA/J	MGP_CBAJ_G0004394	antisense lncRNA gene	Chr7:107720589-107773085 (-)
DBA/2J	MGP_DBA2J_G0004408	antisense lncRNA gene	Chr7:96170397-96217331 (-)
FVB/NJ	MGP_FVBNJ_G0004425	antisense lncRNA gene	Chr7:95962610-96012221 (-)
LP/J	MGP_LPJ_G0004489	antisense lncRNA gene	Chr7:101624988-101672095 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004415	antisense lncRNA gene	Chr7:109257443-109307655 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004599	antisense lncRNA gene	Chr7:99432124-99481648 (-)
PWK/PhJ	MGP_PWKPhJ_G0004312	antisense lncRNA gene	Chr7:89232537-89281470 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004253	antisense lncRNA gene	Chr7:86668411-86717951 (-)
WSB/EiJ	MGP_WSBEiJ_G0004398	antisense lncRNA gene	Chr7:100075002-100121723 (-)

Homology

• Gene Tree
  Rsf1os1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  23 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  1
• Gene trapped
  3
• Radiation induced
  2
• Genomic Mutations
  3 involving Rsf1os1
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000086433 (Evidence)
• NCBI Gene
  75448

Representative Sequences			Length	Strain/Species
genomic	75448	NCBI Gene Model | MGI Sequence Detail	46764	C57BL/6J
transcript	NR_126461	RefSeq | MGI Sequence Detail	324	C57BL/6

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 32

  Phenotypes 23
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

TSS for Rsf1os1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr73583	Chr7:97294327-97294342 (-)	-16 bp