About   Help   FAQ
Nr2c2ap Gene Detail
Summary
  • Symbol
    Nr2c2ap
  • Name
    nuclear receptor 2C2-associated protein
  • Synonyms
    2310073E15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922942
    NCBI Gene: 75692
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:70583983-70586399 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 34.15 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    159 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922942
 protein coding gene Chr8:70583977-70586402 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033691
 protein coding gene Chr8:70379772-70382374 (+)
A/J MGP_AJ_G0033674
 protein coding gene Chr8:67518107-67520513 (+)
AKR/J MGP_AKRJ_G0033599
 protein coding gene Chr8:69438916-69441327 (+)
BALB/cJ MGP_BALBcJ_G0033670
 protein coding gene Chr8:67747689-67750100 (+)
C3H/HeJ MGP_C3HHeJ_G0033380
 protein coding gene Chr8:70083380-70085791 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034187
 protein coding gene Chr8:73038159-73040565 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031131
 protein coding gene Chr8:62337469-62339924 (+)
CAST/EiJ MGP_CASTEiJ_G0032705
 protein coding gene Chr8:69570722-69573003 (+)
CBA/J MGP_CBAJ_G0033358
 protein coding gene Chr8:75685843-75688254 (+)
DBA/2J MGP_DBA2J_G0033512
 protein coding gene Chr8:67244761-67247172 (+)
FVB/NJ MGP_FVBNJ_G0033453
 protein coding gene Chr8:66346086-66348497 (+)
LP/J MGP_LPJ_G0033599
 protein coding gene Chr8:70419706-70422308 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033497
 protein coding gene Chr8:78342002-78344408 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034205
 protein coding gene Chr8:69618786-69621196 (+)
PWK/PhJ MGP_PWKPhJ_G0032413
 protein coding gene Chr8:66529862-66532709 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032249
 protein coding gene Chr8:68593430-68595839 (+)
WSB/EiJ MGP_WSBEiJ_G0032820
 protein coding gene Chr8:69979348-69981759 (+)



Homology
more
  • Human Ortholog
    NR2C2AP, nuclear receptor 2C2 associated protein
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NR2C2AP, nuclear receptor 2C2 associated protein
  • Synonyms
    TRA16
  • Links
    NCBI Gene ID: 126382
    neXtProt AC: NX_Q86WQ0
    UniProt: Q86WQ0

  • Chr Location
    19p13.11; chr19:19201409-19203414 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000071078 Ensembl Gene Model | MGI Sequence Detail 2417 C57BL/6J ±  kb
transcript ENSMUST00000095273 Ensembl | MGI Sequence Detail 1161 Not Applicable  
polypeptide ENSMUSP00000092907 Ensembl | MGI Sequence Detail 140 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 2
References
more
  • Summaries
    All 24
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory