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Svip Gene Detail
Summary
  • Symbol
    Svip
  • Name
    small VCP/p97-interacting protein
  • Synonyms
    1700006C13Rik, 6620401M08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922994
    NCBI Gene: 75744
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:51646919-51655766 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 32.91 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    360 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922994
 protein coding gene Chr7:51646909-51655766 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032308
 protein coding gene Chr7:52762633-52772452 (-)
A/J MGP_AJ_G0032287
 protein coding gene Chr7:51942835-51951644 (-)
AKR/J MGP_AKRJ_G0032223
 protein coding gene Chr7:53153673-53162482 (-)
BALB/cJ MGP_BALBcJ_G0032299
 protein coding gene Chr7:51589208-51597934 (-)
C3H/HeJ MGP_C3HHeJ_G0032012
 protein coding gene Chr7:53557291-53567024 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032792
 protein coding gene Chr7:55136453-55146454 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029799
 protein coding gene Chr7:54941758-54950479 (-)
CAST/EiJ MGP_CASTEiJ_G0031341
 protein coding gene Chr7:44882741-44891484 (-)
CBA/J MGP_CBAJ_G0031977
 protein coding gene Chr7:57019095-57030045 (-)
DBA/2J MGP_DBA2J_G0032134
 protein coding gene Chr7:51111282-51120042 (-)
FVB/NJ MGP_FVBNJ_G0032088
 protein coding gene Chr7:51035236-51044027 (-)
LP/J MGP_LPJ_G0032215
 protein coding gene Chr7:53717124-53726019 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032125
 protein coding gene Chr7:56120998-56129785 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032809
 protein coding gene Chr7:52137725-52146920 (-)
PWK/PhJ MGP_PWKPhJ_G0031061
 protein coding gene Chr7:44415042-44423890 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030902
 protein coding gene Chr7:40284878-40294876 (-)
WSB/EiJ MGP_WSBEiJ_G0031459
 protein coding gene Chr7:52833512-52842246 (-)



Homology
more
  • Human Ortholog
    SVIP, small VCP interacting protein
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SVIP, small VCP interacting protein
  • Links
    NCBI Gene ID: 258010
    neXtProt AC: NX_Q8NHG7
    UniProt: Q8NHG7

  • Chr Location
    11p14.3; chr11:22813799-22830299 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    25
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    15
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074093 Ensembl Gene Model | MGI Sequence Detail 8848 C57BL/6J ±  kb
transcript ENSMUST00000098414 Ensembl | MGI Sequence Detail 3053 Not Applicable  
polypeptide ENSMUSP00000096014 Ensembl | MGI Sequence Detail 77 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 6
Other
Accession IDs
less
MGI:1922697
References
more
  • Summaries
    All 26
    Gene Ontology 5
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory