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Ttc23l Gene Detail
Summary
  • Symbol
    Ttc23l
  • Name
    tetratricopeptide repeat domain 23-like
  • Synonyms
    4930401A09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923027
    NCBI Gene: 75777
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:10500188-10558754 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 5.35 cM, cytoband A2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1937 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923027
 protein coding gene Chr15:10497309-10559006 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021724
 protein coding gene Chr15:7639745-7704204 (-)
A/J MGP_AJ_G0021684
 protein coding gene Chr15:7433256-7491857 (-)
AKR/J MGP_AKRJ_G0021662
 protein coding gene Chr15:7609024-7670713 (-)
BALB/cJ MGP_BALBcJ_G0021691
 protein coding gene Chr15:7350168-7409461 (-)
C3H/HeJ MGP_C3HHeJ_G0021467
 protein coding gene Chr15:7554338-7614515 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022130
 protein coding gene Chr15:7924886-7990450 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019667
 protein coding gene Chr15:6907868-6967734 (-)
CAST/EiJ MGP_CASTEiJ_G0020983
 protein coding gene Chr15:7612331-7677436 (-)
CBA/J MGP_CBAJ_G0021436
 protein coding gene Chr15:8109601-8172098 (-)
DBA/2J MGP_DBA2J_G0021560
 protein coding gene Chr15:7303764-7361960 (-)
FVB/NJ MGP_FVBNJ_G0021538
 protein coding gene Chr15:7165324-7225376 (-)
LP/J MGP_LPJ_G0021628
 protein coding gene Chr15:7537556-7597739 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021563
 protein coding gene Chr15:8390600-8454763 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022153
 protein coding gene Chr15:7578455-7641337 (-)
PWK/PhJ MGP_PWKPhJ_G0020726
 protein coding gene Chr15:7467609-7529658 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020564
 protein coding gene Chr15:7532966-7603341 (-)
WSB/EiJ MGP_WSBEiJ_G0021039
 protein coding gene Chr15:7583838-7645073 (-)



Homology
more
  • Human Ortholog
    TTC23L, tetratricopeptide repeat domain 23 like
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TTC23L, tetratricopeptide repeat domain 23 like
  • Synonyms
    MC25-1
  • Links
    NCBI Gene ID: 153657
    neXtProt AC: NX_Q6PF05
    UniProt: Q6PF05

  • Chr Location
    5p13.2; chr5:34838833-34925682 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022249 Ensembl Gene Model | MGI Sequence Detail 58567 C57BL/6J ±  kb
transcript ENSMUST00000022857 Ensembl | MGI Sequence Detail 1931 Not Applicable  
polypeptide ENSMUSP00000022857 Ensembl | MGI Sequence Detail 458 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000032749 tetratricopeptide repeat protein 23-like
    (term hierarchy)
  • InterPro Domains
    IPR011990 Tetratricopeptide-like helical domain superfamily
    IPR019734 Tetratricopeptide repeat
    IPR042621 Tetratricopeptide repeat protein TTC23/TTC23L
  • GlyGen
    A6H6E9 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
References
more
  • Summaries
    All 24
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory