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4930428O21Rik Gene Detail
Summary
  • Symbol
    4930428O21Rik
  • Name
    RIKEN cDNA 4930428O21 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923034
    NCBI Gene: 654809
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:107846078-107851346 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 52.23 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    238 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923034
 lncRNA gene Chr5:107846078-107851346 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006741
 lincRNA gene Chr5:109743712-109748996 (-)
A/J MGP_AJ_G0006735
 lincRNA gene Chr5:105532660-105538012 (-)
AKR/J MGP_AKRJ_G0006705
 lincRNA gene Chr5:108940528-108945817 (-)
BALB/cJ MGP_BALBcJ_G0006710
 lincRNA gene Chr5:106665897-106671186 (-)
C3H/HeJ MGP_C3HHeJ_G0006656
 lincRNA gene Chr5:109386689-109391954 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006875
 lincRNA gene Chr5:114233032-114238300 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006132
 lincRNA gene Chr5:100592635-100600845 (-)
CAST/EiJ MGP_CASTEiJ_G0006579
 lincRNA gene Chr5:108326813-108332318 (-)
CBA/J MGP_CBAJ_G0006637
 lincRNA gene Chr5:118080599-118086019 (-)
DBA/2J MGP_DBA2J_G0006658
 lincRNA gene Chr5:105667635-105672962 (-)
FVB/NJ MGP_FVBNJ_G0006682
 lincRNA gene Chr5:104398360-104403617 (-)
LP/J MGP_LPJ_G0006742
 lincRNA gene Chr5:110330799-110336083 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006666
 lincRNA gene Chr5:122983652-122988996 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006878
 lincRNA gene Chr5:108504775-108510131 (-)
PWK/PhJ MGP_PWKPhJ_G0006518
 lincRNA gene Chr5:104475709-104481331 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006424
 lincRNA gene Chr5:106012093-106017204 (-)
WSB/EiJ MGP_WSBEiJ_G0006630
 lincRNA gene Chr5:108799126-108804406 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    3 involving 4930428O21Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 654809 NCBI Gene Model | MGI Sequence Detail 5269 C57BL/6J ±  kb
transcript NR_045871 RefSeq | MGI Sequence Detail 1740 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory