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4930537H20Rik Gene Detail
Summary
  • Symbol
    4930537H20Rik
  • Name
    RIKEN cDNA 4930537H20 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923075
    NCBI Gene: 75825
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:90198792-90201290 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    93 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923075
 lncRNA gene Chr3:90198792-90201290 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003780
 antisense lncRNA gene Chr3:90588757-90590862 (-)
A/J MGP_AJ_G0003760
 antisense lncRNA gene Chr3:87576798-87578565 (-)
AKR/J MGP_AKRJ_G0003737
 antisense lncRNA gene Chr3:89723673-89725355 (-)
BALB/cJ MGP_BALBcJ_G0003749
 antisense lncRNA gene Chr3:87536199-87537694 (-)
C3H/HeJ MGP_C3HHeJ_G0003695
 antisense lncRNA gene Chr3:89892539-89894741 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0003394
 antisense lncRNA gene Chr3:83073613-83075295 (-)
CAST/EiJ MGP_CASTEiJ_G0003659
 antisense lncRNA gene Chr3:90274681-90276283 (-)
CBA/J MGP_CBAJ_G0003691
 antisense lncRNA gene Chr3:97230998-97232630 (-)
DBA/2J MGP_DBA2J_G0003701
 antisense lncRNA gene Chr3:86946910-86948475 (-)
FVB/NJ MGP_FVBNJ_G0003722
 antisense lncRNA gene Chr3:85282387-85283908 (-)
LP/J MGP_LPJ_G0003781
 antisense lncRNA gene Chr3:91657933-91659313 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0003890
 antisense lncRNA gene Chr3:89477176-89479402 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0003558
 antisense lncRNA gene Chr3:88658664-88662419 (-)
WSB/EiJ MGP_WSBEiJ_G0003695
 antisense lncRNA gene Chr3:89874606-89876270 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Gene trapped
    7
  • Genomic Mutations
    1 involving 4930537H20Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    18
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105350 Ensembl Gene Model | MGI Sequence Detail 2499 C57BL/6J ±  kb
transcript ENSMUST00000200437 Ensembl | MGI Sequence Detail 2499 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 10
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory