4930587E11Rik Gene Detail

Summary

• Symbol
  4930587E11Rik
• Name
  RIKEN cDNA 4930587E11 gene
• Synonyms
  4930523E13Rik, Gm44188

• Feature Type
  lncRNA gene
• IDs
  MGI:1923143
  NCBI Gene: 75893
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:102243061-102313635 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  2337 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1923143	lncRNA gene	Chr6:102243061-102313638 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004330	antisense lncRNA gene	Chr6:104359731-104432549 (+)
A/J	MGP_AJ_G0004308	antisense lncRNA gene	Chr6:100366088-100436238 (+)
AKR/J	MGP_AKRJ_G0004290	antisense lncRNA gene	Chr6:103128245-103201509 (+)
BALB/cJ	MGP_BALBcJ_G0004294	antisense lncRNA gene	Chr6:100332668-100405167 (+)
C3H/HeJ	MGP_C3HHeJ_G0004211	antisense lncRNA gene	Chr6:81209539-81280428 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004443	antisense lncRNA gene	Chr6:107017208-107088676 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003911	antisense lncRNA gene	Chr6:98078669-98149046 (+)
CAST/EiJ	MGP_CASTEiJ_G0004204	antisense lncRNA gene	Chr6:103418716-103491604 (+)
CBA/J	MGP_CBAJ_G0004236	antisense lncRNA gene	Chr6:111128034-111203444 (+)
DBA/2J	MGP_DBA2J_G0004252	antisense lncRNA gene	Chr6:99501646-99573340 (+)
FVB/NJ	MGP_FVBNJ_G0004268	antisense lncRNA gene	Chr6:98642424-98713701 (+)
LP/J	MGP_LPJ_G0004331	antisense lncRNA gene	Chr6:104417895-104493085 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004259	antisense lncRNA gene	Chr6:114924697-115002145 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004441	antisense lncRNA gene	Chr6:103043212-103117668 (+)
PWK/PhJ	MGP_PWKPhJ_G0004157	antisense lncRNA gene	Chr6:98515204-98586785 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004100	antisense lncRNA gene	Chr6:101902132-101978550 (+)
WSB/EiJ	MGP_WSBEiJ_G0004241	antisense lncRNA gene	Chr6:103555501-103626482 (+)

Homology

• Gene Tree
  4930587E11Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving 4930587E11Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  2

• Ensembl
  ENSMUSG00000107563 (Evidence)
• NCBI Gene
  75893

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107563	Ensembl Gene Model | MGI Sequence Detail	70575	C57BL/6J
transcript	ENSMUST00000204857	Ensembl | MGI Sequence Detail	807	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

Other
Accession IDs

MGI:1922362, MGI:5690580

References

• Summaries
  All 12

  Phenotypes 4
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)