About   Help   FAQ
Gm33989 Gene Detail
Summary
  • Symbol
    Gm33989
  • Name
    predicted gene, 33989
  • Synonyms
    6230415J03Rik, Gm37494, Gm4790
Location &
Maps
more
  • Sequence Map
    Chr7:39193826-39230013 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, Syntenic
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1318 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5593148
 protein coding gene Chr7:39189384-39230014 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007159
 lincRNA gene Chr7:39168616-39205542 (+)
A/J MGP_AJ_G0007155
 lincRNA gene Chr7:38248080-38285704 (+)
AKR/J MGP_AKRJ_G0007125
 lincRNA gene Chr7:39366945-39405692 (+)
BALB/cJ MGP_BALBcJ_G0007133
 lincRNA gene Chr7:38493532-38531021 (+)
C3H/HeJ MGP_C3HHeJ_G0007077
 lincRNA gene Chr7:40009852-40046908 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007298
 lincRNA gene Chr7:41099195-41136078 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006517
 lincRNA gene Chr7:38804037-38840552 (+)
CAST/EiJ MGP_CASTEiJ_G0006981
 lincRNA gene Chr7:31125178-31162329 (+)
CBA/J MGP_CBAJ_G0007059
 lincRNA gene Chr7:42388187-42425244 (+)
DBA/2J MGP_DBA2J_G0007081
 lincRNA gene Chr7:38167809-38203838 (+)
FVB/NJ MGP_FVBNJ_G0007103
 lincRNA gene Chr7:37932964-37970376 (+)
LP/J MGP_LPJ_G0007163
 lincRNA gene Chr7:39549593-39588746 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007082
 lincRNA gene Chr7:41203161-41246375 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007304
 lincRNA gene Chr7:38720299-38757112 (+)
PWK/PhJ MGP_PWKPhJ_G0006923
 lincRNA gene Chr7:31182327-31218873 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006834
 lincRNA gene Chr7:27453033-27496412 (+)
WSB/EiJ MGP_WSBEiJ_G0007042
 lincRNA gene Chr7:39157589-39196177 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    8
Sequences &
Gene Models
less
  • All Sequences
    54
  • RefSeq
    24
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000108621 Ensembl Gene Model | MGI Sequence Detail 36188 C57BL/6J ±  kb
transcript ENSMUST00000188038 Ensembl | MGI Sequence Detail 16045 Not Applicable  
polypeptide NP_001365602 RefSeq | MGI Sequence Detail 918 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 2
Other
Accession IDs
less
MGI:1923398, MGI:3646468, MGI:5610722
References
more
  • Summaries
    All 16
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory