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0610040J01Rik Gene Detail
Summary
  • Symbol
    0610040J01Rik
  • Name
    RIKEN cDNA 0610040J01 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923511
    NCBI Gene: 76261
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:63969833-64056968 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 32.80 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2404 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923511
 protein coding gene Chr5:63969706-64056968 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029563
 protein coding gene Chr5:63384044-63466460 (+)
A/J MGP_AJ_G0029531
 protein coding gene Chr5:61019779-61101661 (+)
AKR/J MGP_AKRJ_G0029479
 protein coding gene Chr5:62919237-63003501 (+)
BALB/cJ MGP_BALBcJ_G0029540
 protein coding gene Chr5:61698058-61782415 (+)
C3H/HeJ MGP_C3HHeJ_G0029263
 protein coding gene Chr5:63293263-63377401 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029994
 protein coding gene Chr5:66006726-66101624 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027234
 protein coding gene Chr5:57133971-57213727 (+)
CAST/EiJ MGP_CASTEiJ_G0028671
 protein coding gene Chr5:62359191-62442798 (+)
CBA/J MGP_CBAJ_G0029232
 protein coding gene Chr5:68105646-68200269 (+)
DBA/2J MGP_DBA2J_G0029378
 protein coding gene Chr5:61046385-61128570 (+)
FVB/NJ MGP_FVBNJ_G0029338
 protein coding gene Chr5:60234344-60314890 (+)
LP/J MGP_LPJ_G0029463
 protein coding gene Chr5:63837669-63925462 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029366
 protein coding gene Chr5:71067970-71150950 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030027
 protein coding gene Chr5:62625938-62714542 (+)
PWK/PhJ MGP_PWKPhJ_G0028395
 protein coding gene Chr5:60030070-60111930 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028229
 protein coding gene Chr5:61969524-62061307 (+)
WSB/EiJ MGP_WSBEiJ_G0028752
 protein coding gene Chr5:62828398-62913121 (+)



Homology
more
  • Human Ortholog
    C4orf19, chromosome 4 open reading frame 19
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C4orf19, chromosome 4 open reading frame 19
  • Links
    NCBI Gene ID: 55286
    neXtProt AC: NX_Q8IY42
    UniProt: Q8IY42

  • Chr Location
    4p14; chr4:37453255-37623495 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    22 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    820
  • Tissues
    37
  • cDNA Data
    53
  • Literature Summary
    4
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 76261 NCBI Gene Model | MGI Sequence Detail 87136 C57BL/6J ±  kb
    transcript NM_001417897 RefSeq | MGI Sequence Detail 2144 C57BL/6  
    polypeptide Q99K99 UniProt | EBI | MGI Sequence Detail 313 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 53
      cDNA 53

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:2140955
    References
    more
    • Summaries
      All 44
      Developmental Gene Expression 4
      Phenotypes 22
    • Earliest
      J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory