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Lrrc27 Gene Detail
Summary
  • Symbol
    Lrrc27
  • Name
    leucine rich repeat containing 27
  • Synonyms
    1700071K18Rik, 2310044E02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923862
    NCBI Gene: 76612
  • Alliance
    gene page
  • Transcription Start Sites
    14 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:138792904-138822895 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 84.30 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    936 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923862
 protein coding gene Chr7:138791548-138822895 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033148
 protein coding gene Chr7:144216277-144254179 (+)
A/J MGP_AJ_G0033130
 protein coding gene Chr7:140148551-140178558 (+)
AKR/J MGP_AKRJ_G0033062
 protein coding gene Chr7:143921341-143957017 (+)
BALB/cJ MGP_BALBcJ_G0033131
 protein coding gene Chr7:139889947-139920753 (+)
C3H/HeJ MGP_C3HHeJ_G0032845
 protein coding gene Chr7:143735951-143775491 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033642
 protein coding gene Chr7:149533272-149575991 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030615
 protein coding gene Chr7:141287194-141318682 (+)
CAST/EiJ MGP_CASTEiJ_G0032175
 protein coding gene Chr7:136025034-136064421 (+)
CBA/J MGP_CBAJ_G0032818
 protein coding gene Chr7:154584762-154627887 (+)
DBA/2J MGP_DBA2J_G0032970
 protein coding gene Chr7:138105642-138137599 (+)
FVB/NJ MGP_FVBNJ_G0032923
 protein coding gene Chr7:137989865-138021686 (+)
LP/J MGP_LPJ_G0033064
 protein coding gene Chr7:145754860-145798658 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032955
 protein coding gene Chr7:155296028-155333006 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033662
 protein coding gene Chr7:142919608-142961020 (+)
PWK/PhJ MGP_PWKPhJ_G0031881
 protein coding gene Chr7:131276379-131308386 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031726
 protein coding gene Chr7:129760040-129793099 (+)
WSB/EiJ MGP_WSBEiJ_G0032286
 protein coding gene Chr7:143837821-143874727 (+)



Homology
more
  • Human Ortholog
    LRRC27, leucine rich repeat containing 27
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LRRC27, leucine rich repeat containing 27
  • Links
    NCBI Gene ID: 80313
    neXtProt AC: NX_Q9C0I9
    UniProt: Q9C0I9

  • Chr Location
    10q26.3; chr10:132330063-132381508 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    30
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000015980 Ensembl Gene Model | MGI Sequence Detail 29992 C57BL/6J ±  kb
transcript ENSMUST00000016124 Ensembl | MGI Sequence Detail 2113 Not Applicable  
polypeptide ENSMUSP00000016124 Ensembl | MGI Sequence Detail 523 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000031697 leucine-rich repeat-containing protein 27
    (term hierarchy)
  • InterPro Domains
    IPR001611 Leucine-rich repeat
    IPR050715 Leucine-rich repeat and signaling effector domain-containing protein
    IPR032675 Leucine-rich repeat domain superfamily
    IPR003591 Leucine-rich repeat, typical subtype
Molecular
Reagents
less
  • All nucleic 30
    cDNA 30

    Microarray probesets 5
Other
Accession IDs
less
MGI:1916930
References
more
  • Summaries
    All 21
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory