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1500002F19Rik Gene Detail
Summary
  • Symbol
    1500002F19Rik
  • Name
    RIKEN cDNA 1500002F19 gene
  • Synonyms
    BC002195
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923933
    NCBI Gene: 76683
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:132476468-132532926 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 76.32 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1392 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923933
 lncRNA gene Chr7:132476343-132535739 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007289
 lincRNA gene Chr7:137600245-137641656 (-)
A/J MGP_AJ_G0007286
 lincRNA gene Chr7:133809455-133850194 (-)
AKR/J MGP_AKRJ_G0007256
 lincRNA gene Chr7:137375012-137421134 (-)
BALB/cJ MGP_BALBcJ_G0007264
 lincRNA gene Chr7:133492666-133533447 (-)
C3H/HeJ MGP_C3HHeJ_G0007208
 lincRNA gene Chr7:137213032-137254315 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007434
 lincRNA gene Chr7:142833756-142885525 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006638
 lincRNA gene Chr7:135091324-135132299 (-)
CAST/EiJ MGP_CASTEiJ_G0007110
 lincRNA gene Chr7:129126686-129169887 (-)
CBA/J MGP_CBAJ_G0007191
 lincRNA gene Chr7:147676049-147716053 (-)
DBA/2J MGP_DBA2J_G0007212
 lincRNA gene Chr7:131826049-131865581 (-)
FVB/NJ MGP_FVBNJ_G0007234
 lincRNA gene Chr7:131661746-131704940 (-)
LP/J MGP_LPJ_G0007294
 lincRNA gene Chr7:139118417-139160720 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007211
 lincRNA gene Chr7:148587973-148633794 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007437
 lincRNA gene Chr7:136374856-136418974 (-)
PWK/PhJ MGP_PWKPhJ_G0007052
 lincRNA gene Chr7:124846400-124887354 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006960
 lincRNA gene Chr7:123153750-123189996 (-)
WSB/EiJ MGP_WSBEiJ_G0007170
 lincRNA gene Chr7:137272155-137314671 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    31
  • RefSeq
    5
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097595 Ensembl Gene Model | MGI Sequence Detail 56459 C57BL/6J ±  kb
transcript ENSMUST00000180905 Ensembl | MGI Sequence Detail 712 Not Applicable  
polypeptide Q99LW3 UniProt | EBI | MGI Sequence Detail 28 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 3
Other
Accession IDs
less
MGI:3641907
References
more
  • Summaries
    All 15
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:190322 Archambaud C, et al., Impact of lactobacilli on orally acquired listeriosis. Proc Natl Acad Sci U S A. 2012 Oct 9;109(41):16684-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory