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1700109H08Rik Gene Detail
Summary
  • Symbol
    1700109H08Rik
  • Name
    RIKEN cDNA 1700109H08 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924286
    NCBI Gene: 77036
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:3621716-3634341 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 2.24 cM, cytoband A2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    409 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924286
 protein coding gene Chr5:3621566-3634356 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029257
 protein coding gene Chr5:384651-397415 (+)
A/J MGP_AJ_G0029222
 protein coding gene Chr5:267451-280241 (+)
AKR/J MGP_AKRJ_G0029170
 protein coding gene Chr5:256787-269528 (+)
BALB/cJ MGP_BALBcJ_G0029239
 protein coding gene Chr5:499924-512666 (+)
C3H/HeJ MGP_C3HHeJ_G0028959
 protein coding gene Chr5:435637-448423 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029688
 protein coding gene Chr5:644330-657111 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026931
 protein coding gene Chr5:309935-325607 (+)
CAST/EiJ MGP_CASTEiJ_G0028371
 protein coding gene Chr5:451784-467914 (+)
CBA/J MGP_CBAJ_G0028921
 protein coding gene Chr5:539524-552285 (+)
DBA/2J MGP_DBA2J_G0029071
 protein coding gene Chr5:413558-426287 (+)
FVB/NJ MGP_FVBNJ_G0029033
 protein coding gene Chr5:321998-337605 (+)
LP/J MGP_LPJ_G0029161
 protein coding gene Chr5:425283-438060 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029060
 protein coding gene Chr5:344366-360994 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029719
 protein coding gene Chr5:388754-401569 (+)
PWK/PhJ MGP_PWKPhJ_G0028092
 protein coding gene Chr5:394064-410452 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027926
 protein coding gene Chr5:669854-685407 (+)
WSB/EiJ MGP_WSBEiJ_G0028451
 protein coding gene Chr5:411403-429101 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 77036 NCBI Gene Model | MGI Sequence Detail 12626 C57BL/6J ±  kb
transcript NM_029843 RefSeq | MGI Sequence Detail 715 C57BL/6  
polypeptide NP_084119 RefSeq | MGI Sequence Detail 210 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 14
    Gene Ontology 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory