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Tmco4 Gene Detail
Summary
  • Symbol
    Tmco4
  • Name
    transmembrane and coiled-coil domains 4
  • Synonyms
    4632413C14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924306
    NCBI Gene: 77056
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:138700199-138786482 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 70.57 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2560 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924306
 protein coding gene Chr4:138699588-138786484 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029009
 protein coding gene Chr4:141778753-141867313 (+)
A/J MGP_AJ_G0028968
 protein coding gene Chr4:135685882-135770742 (+)
AKR/J MGP_AKRJ_G0028920
 protein coding gene Chr4:139574112-139661018 (+)
BALB/cJ MGP_BALBcJ_G0028992
 protein coding gene Chr4:136362403-136448463 (+)
C3H/HeJ MGP_C3HHeJ_G0028706
 protein coding gene Chr4:139946660-140035947 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029433
 protein coding gene Chr4:146801977-146892042 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026704
 protein coding gene Chr4:128658935-128741839 (+)
CAST/EiJ MGP_CASTEiJ_G0028138
 protein coding gene Chr4:138122527-138215429 (+)
CBA/J MGP_CBAJ_G0028670
 protein coding gene Chr4:151022732-151116435 (+)
DBA/2J MGP_DBA2J_G0028820
 protein coding gene Chr4:136071112-136155264 (+)
FVB/NJ MGP_FVBNJ_G0028787
 protein coding gene Chr4:135099712-135188021 (+)
LP/J MGP_LPJ_G0028919
 protein coding gene Chr4:141854026-141947841 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028813
 protein coding gene Chr4:154954646-155038845 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029471
 protein coding gene Chr4:140099322-140188450 (+)
PWK/PhJ MGP_PWKPhJ_G0027859
 protein coding gene Chr4:132930973-133014862 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027684
 protein coding gene Chr4:135862586-135947986 (+)
WSB/EiJ MGP_WSBEiJ_G0028216
 protein coding gene Chr4:140350469-140435393 (+)



Homology
more
  • Human Ortholog
    TMCO4, transmembrane and coiled-coil domains 4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMCO4, transmembrane and coiled-coil domains 4
  • Links
    NCBI Gene ID: 255104
    neXtProt AC: NX_Q5TGY1
    UniProt: Q5TGY1

  • Chr Location
    1p36.13; chr1:19682240-19799945 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    11
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041143 Ensembl Gene Model | MGI Sequence Detail 86284 C57BL/6J ±  kb
transcript ENSMUST00000043042 Ensembl | MGI Sequence Detail 2922 Not Applicable  
polypeptide ENSMUSP00000041388 Ensembl | MGI Sequence Detail 631 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 4
Other
Accession IDs
less
MGI:2140278
References
more
  • Summaries
    All 26
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory