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Garre1 Gene Detail
Summary
  • Symbol
    Garre1
  • Name
    granule associated Rac and RHOG effector 1
  • Synonyms
    4931406P16Rik, mKIAA0355
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924311
    NCBI Gene: 233103
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:33936132-34012976 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 19.48 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1721 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924311
 protein coding gene Chr7:33936132-34012990 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032075
 protein coding gene Chr7:33495569-33579441 (-)
A/J MGP_AJ_G0032055
 protein coding gene Chr7:32675658-32754292 (-)
AKR/J MGP_AKRJ_G0031988
 protein coding gene Chr7:33449844-33526744 (-)
BALB/cJ MGP_BALBcJ_G0032062
 protein coding gene Chr7:32965298-33044195 (-)
C3H/HeJ MGP_C3HHeJ_G0031779
 protein coding gene Chr7:34334742-34412466 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032539
 protein coding gene Chr7:35214088-35294646 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029572
 protein coding gene Chr7:33410407-33487482 (-)
CAST/EiJ MGP_CASTEiJ_G0031114
 protein coding gene Chr7:25449202-25530979 (-)
CBA/J MGP_CBAJ_G0031747
 protein coding gene Chr7:36303694-36383494 (-)
DBA/2J MGP_DBA2J_G0031899
 protein coding gene Chr7:32526915-32605004 (-)
FVB/NJ MGP_FVBNJ_G0031854
 protein coding gene Chr7:32437025-32513155 (-)
LP/J MGP_LPJ_G0031976
 protein coding gene Chr7:33872687-33947806 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031892
 protein coding gene Chr7:35361274-35447354 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032554
 protein coding gene Chr7:32980532-33060226 (-)
PWK/PhJ MGP_PWKPhJ_G0030836
 protein coding gene Chr7:25837244-25913770 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030671
 protein coding gene Chr7:22542099-22622356 (-)
WSB/EiJ MGP_WSBEiJ_G0031224
 protein coding gene Chr7:33515007-33595123 (-)



Homology
more
  • Human Ortholog
    GARRE1, granule associated Rac and RHOG effector 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GARRE1, granule associated Rac and RHOG effector 1
  • Synonyms
    KIAA0355, MiniBAR
  • Links
    NCBI Gene ID: 9710
    neXtProt AC: NX_O15063
    UniProt: O15063

  • Chr Location
    19q13.11; chr19:34254552-34355566 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    6
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    731
  • Tissues
    2
  • cDNA Data
    8
  • Literature Summary
    2
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000066571 Ensembl Gene Model | MGI Sequence Detail 76845 C57BL/6J ±  kb
transcript ENSMUST00000085592 Ensembl | MGI Sequence Detail 5798 Not Applicable  
polypeptide ENSMUSP00000082730 Ensembl | MGI Sequence Detail 1059 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    7 Sequences
  • InterPro Domains
    IPR031813 Domain of unknown function DUF4745
    IPR043385 Granule associated Rac and RHOG effector protein 1
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 6
Other
Accession IDs
less
MGI:2141841, MGI:6393870
References
more
  • Summaries
    All 30
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory