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6030407O03Rik Gene Detail
Summary
  • Symbol
    6030407O03Rik
  • Name
    RIKEN cDNA 6030407O03 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924410
    NCBI Gene: 109198
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr1:73657540-73903625 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 38.01 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    6265 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924410
 lncRNA gene Chr1:73657247-73903625 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004875
 lincRNA gene Chr1:74183398-74437180 (-)
A/J MGP_AJ_G0004856
 lincRNA gene Chr1:71581830-71831293 (-)
AKR/J MGP_AKRJ_G0004834
 lincRNA gene Chr1:73560379-73819089 (-)
BALB/cJ MGP_BALBcJ_G0004837
 lincRNA gene Chr1:71639499-71899418 (-)
C3H/HeJ MGP_C3HHeJ_G0004786
 lincRNA gene Chr1:73900987-74164623 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004988
 lincRNA gene Chr1:77056824-77336192 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004415
 lincRNA gene Chr1:67181318-67420021 (-)
CAST/EiJ MGP_CASTEiJ_G0004739
 lincRNA gene Chr1:73211802-73474040 (-)
CBA/J MGP_CBAJ_G0004779
 lincRNA gene Chr1:79575405-79851865 (-)
DBA/2J MGP_DBA2J_G0004797
 lincRNA gene Chr1:70920052-71164267 (-)
FVB/NJ MGP_FVBNJ_G0004817
 lincRNA gene Chr1:70095624-70338482 (-)
LP/J MGP_LPJ_G0004876
 lincRNA gene Chr1:75259812-75524276 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004801
 lincRNA gene Chr1:82982394-83259092 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004992
 lincRNA gene Chr1:73615327-73879234 (-)
PWK/PhJ MGP_PWKPhJ_G0004692
 lincRNA gene Chr1:70361750-70612971 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004618
 lincRNA gene Chr1:72973421-73230384 (-)
WSB/EiJ MGP_WSBEiJ_G0004784
 lincRNA gene Chr1:73436945-73686077 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 6030407O03Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 109198 NCBI Gene Model | MGI Sequence Detail 246086 C57BL/6J ±  kb
transcript NR_045311 RefSeq | MGI Sequence Detail 1801 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory