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Ppp4r1l-ps Pseudogene Detail
Summary
  • Symbol
    Ppp4r1l-ps
  • Name
    protein phosphatase 4, regulatory subunit 1-like, pseudogene
  • Synonyms
    1700007P14Rik, 5830403E09Rik, C030010B13Rik
Location &
Maps
more
  • Sequence Map
    Chr2:173422992-173471343 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 97.06 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1309 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924560
 pseudogene Chr2:173421113-173501332 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039815
 pseudogene Chr2:179876870-179962671 (-)
A/J MGP_AJ_G0039814
 pseudogene Chr2:172302898-172383191 (-)
AKR/J MGP_AKRJ_G0039741
 pseudogene Chr2:177494650-177581860 (-)
BALB/cJ MGP_BALBcJ_G0039787
 pseudogene Chr2:172707111-172786716 (-)
C3H/HeJ MGP_C3HHeJ_G0039442
 pseudogene Chr2:177884149-177966100 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040355
 pseudogene Chr2:185050323-185140158 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036963
 pseudogene Chr2:165532426-165614340 (-)
CAST/EiJ MGP_CASTEiJ_G0026135
 pseudogene Chr2:178601700-178685856 (-)
CBA/J MGP_CBAJ_G0039413
 pseudogene Chr2:191965779-192053981 (-)
DBA/2J MGP_DBA2J_G0039613
 pseudogene Chr2:171393825-171473872 (-)
FVB/NJ MGP_FVBNJ_G0039570
 pseudogene Chr2:170028889-170109703 (-)
LP/J MGP_LPJ_G0039648
 pseudogene Chr2:179799119-179880174 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039572
 pseudogene Chr2:194885353-194970171 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040457
 pseudogene Chr2:177516484-177599892 (-)
PWK/PhJ MGP_PWKPhJ_G0038234
 pseudogene Chr2:171204069-171286804 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037977
 pseudogene Chr2:176551687-176632475 (-)
WSB/EiJ MGP_WSBEiJ_G0038789
 pseudogene Chr2:178469049-178549317 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    18
Sequences &
Gene Models
less
  • All Sequences
    41
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055897 Ensembl Gene Model | MGI Sequence Detail 48352 C57BL/6J ±  kb
transcript ENSMUST00000132669 Ensembl | MGI Sequence Detail 2767 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 5
Other
Accession IDs
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MGI:1922724, MGI:2442357
References
more
  • Summaries
    All 19
    Phenotypes 3
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory