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9530026F06Rik Gene Detail
Summary
  • Symbol
    9530026F06Rik
  • Name
    RIKEN cDNA 9530026F06 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924591
    NCBI Gene: 77341
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr1:61417591-61435063 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 30.64 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    598 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924591
 lncRNA gene Chr1:61417591-61435063 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004846
 lincRNA gene Chr1:61465463-61482660 (+)
A/J MGP_AJ_G0004827
 lincRNA gene Chr1:59289797-59310044 (+)
AKR/J MGP_AKRJ_G0004806
 lincRNA gene Chr1:60971266-60990897 (+)
BALB/cJ MGP_BALBcJ_G0004809
 lincRNA gene Chr1:59341443-59359780 (+)
C3H/HeJ MGP_C3HHeJ_G0004757
 lincRNA gene Chr1:61211739-61231018 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004959
 lincRNA gene Chr1:63863070-63881063 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004388
 lincRNA gene Chr1:55482818-55500110 (+)
CAST/EiJ MGP_CASTEiJ_G0004711
 lincRNA gene Chr1:60431996-60453496 (+)
CBA/J MGP_CBAJ_G0004750
 lincRNA gene Chr1:65870935-65896158 (+)
DBA/2J MGP_DBA2J_G0004768
 lincRNA gene Chr1:58725112-58743995 (+)
FVB/NJ MGP_FVBNJ_G0004788
 lincRNA gene Chr1:58019141-58035676 (+)
LP/J MGP_LPJ_G0004847
 lincRNA gene Chr1:62347914-62365912 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004772
 lincRNA gene Chr1:68789036-68807973 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004963
 lincRNA gene Chr1:60901217-60918331 (+)
PWK/PhJ MGP_PWKPhJ_G0004664
 lincRNA gene Chr1:58081579-58099726 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004590
 lincRNA gene Chr1:60433030-60452598 (+)
WSB/EiJ MGP_WSBEiJ_G0004755
 lincRNA gene Chr1:60602287-60621038 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 9530026F06Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 77341 NCBI Gene Model | MGI Sequence Detail 17473 C57BL/6J ±  kb
transcript NR_040483 RefSeq | MGI Sequence Detail 892 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 11
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory