About   Help   FAQ
C030032O16Rik Gene Detail
Summary
  • Symbol
    C030032O16Rik
  • Name
    RIKEN cDNA C030032O16 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924718
    NCBI Gene: 77468
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:104062849-104063564 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    63 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924718
 lncRNA gene Chr3:104062849-104063564 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0036972
 sense intronic lncRNA gene Chr3:102099014-102099729 (-)
AKR/J MGP_AKRJ_G0036919
 sense intronic lncRNA gene Chr3:104596364-104597079 (-)
BALB/cJ MGP_BALBcJ_G0036962
 sense intronic lncRNA gene Chr3:101874367-101875078 (-)
C3H/HeJ MGP_C3HHeJ_G0036649
 sense intronic lncRNA gene Chr3:104973880-104974595 (-)
C57BL/6NJ MGP_C57BL6NJ_G0037475
 sense intronic lncRNA gene Chr3:109368937-109369652 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0036624
 sense intronic lncRNA gene Chr3:113110359-113111074 (-)
DBA/2J MGP_DBA2J_G0036799
 sense intronic lncRNA gene Chr3:101347247-101347962 (-)
FVB/NJ MGP_FVBNJ_G0036749
 sense intronic lncRNA gene Chr3:99278675-99279390 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0036757
 sense intronic lncRNA gene Chr3:119247609-119248320 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0037593
 sense intronic lncRNA gene Chr3:104154153-104154864 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    14
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106063 Ensembl Gene Model | MGI Sequence Detail 716 C57BL/6J ±  kb
transcript ENSMUST00000196427 Ensembl | MGI Sequence Detail 716 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 8
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory