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C430039J01Rik Gene Detail
Summary
  • Symbol
    C430039J01Rik
  • Name
    RIKEN cDNA C430039J01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924901
    NCBI Gene: 77651
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:116009082-116010038 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    77 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924901
 lncRNA gene Chr7:116009082-116010038 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002223
 unclassified gene Chr7:120150698-120151650 (-)
A/J MGP_AJ_G0002200
 unclassified gene Chr7:117135707-117136663 (-)
AKR/J MGP_AKRJ_G0002186
 unclassified gene Chr7:120110765-120111721 (-)
BALB/cJ MGP_BALBcJ_G0002195
 unclassified gene Chr7:116854799-116855755 (-)
C3H/HeJ MGP_C3HHeJ_G0002171
 unclassified gene Chr7:120034656-120035612 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002320
 unclassified gene Chr7:124961663-124962619 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0001937
 unclassified gene Chr7:118646219-118647171 (-)
CAST/EiJ MGP_CASTEiJ_G0002136
 unclassified gene Chr7:111730801-111731755 (-)
CBA/J MGP_CBAJ_G0002165
 unclassified gene Chr7:129106440-129107396 (-)
DBA/2J MGP_DBA2J_G0002168
 unclassified gene Chr7:115184759-115185715 (-)
FVB/NJ MGP_FVBNJ_G0002178
 unclassified gene Chr7:115034556-115035512 (-)
LP/J MGP_LPJ_G0002222
 unclassified gene Chr7:121634858-121635810 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002153
 unclassified gene Chr7:130728122-130729078 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002308
 unclassified gene Chr7:119097297-119098253 (-)
PWK/PhJ MGP_PWKPhJ_G0002096
 unclassified gene Chr7:108067496-108068445 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002060
 unclassified gene Chr7:105832585-105833546 (-)
WSB/EiJ MGP_WSBEiJ_G0002163
 unclassified gene Chr7:119969919-119970875 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000108359 Ensembl Gene Model | MGI Sequence Detail 957 C57BL/6J ±  kb
transcript AK021246 GenBank | ENA | DDBJ | MGI Sequence Detail 955 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory