Gvin-ps1 Gene Detail

Summary

• Symbol
  Gvin-ps1
• Name
  GTPase, very large interferon inducible, pseudogene 1
• Synonyms
  9130208D14Rik, Gm45912

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1924950
  NCBI Gene: 77700
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:105472464-105505218 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  4

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1924950	lncRNA gene	Chr7:105472464-105505218 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040651	pseudogene	Chr7:109094882-109107499 (-)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0041336	pseudogene	Chr7:114095045-114437177 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0039575	pseudogene	Chr7:108726163-109354109 (-)

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gvin-ps1
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  3

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15
• RefSeq
  4

• Ensembl
  ENSMUSG00000086513 (Evidence), ENSMUSG00000109685 (Evidence)
• NCBI Gene
  77700

Representative Sequences			Length	Strain/Species
genomic	77700	NCBI Gene Model | MGI Sequence Detail	32755	C57BL/6J
transcript	NM_001434475	RefSeq | MGI Sequence Detail	8566	C57BL/6
polypeptide	NP_001421404	RefSeq | MGI Sequence Detail	2430	C57BL/6

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 2

Other
Accession IDs

MGI:5805027, MGI:6441884

References

• Summaries
  All 22

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67